Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF2802 and GFF2803 are separated by 55 nucleotidesGFF2803 and GFF2804 are separated by 34 nucleotidesGFF2804 and GFF2805 overlap by 4 nucleotidesGFF2805 and GFF2806 are separated by 147 nucleotides GFF2802 - ATP-dependent DNA helicase RecG (EC 3.6.1.-), at 400,169 to 402,265 GFF2802 GFF2803 - Hydrogen peroxide-inducible genes activator, at 402,321 to 403,280 GFF2803 GFF2804 - Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1), at 403,315 to 403,821 GFF2804 GFF2805 - 4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.39), at 403,818 to 404,672 GFF2805 GFF2806 - Pyrroline-5-carboxylate reductase (EC 1.5.1.2), at 404,820 to 405,650 GFF2806
Group Condition GFF2802 GFF2803 GFF2804 GFF2805 GFF2806
carbon source Ying_Nucleobase14 rep A; time point 2 -0.4 -0.8 -0.4 N.D. -5.0
carbon source Ying_Nucleobase14 rep B; time point 2 -0.3 -0.5 -0.3 N.D. -5.0
carbon source Ying_sugar7 rep A; time point 3 -0.4 -0.4 -0.2 N.D. -4.5
carbon source Ying_Others16 rep B; time point 3 -0.7 -0.3 -0.1 N.D. -4.4
carbon source Ying_Nucleobase14 rep C; time point 1 -0.4 +0.1 -0.3 N.D. -4.7
carbon source Ying_sugar7 rep C; time point 3 -0.4 -0.4 -0.1 N.D. -4.3
carbon source Ying_sugar7 rep A; time point 2 -0.2 -0.1 -0.3 N.D. -4.1
carbon source Ying_AminoAcid20 rep A; time point 2 -0.9 -0.3 -1.8 N.D. -1.8
carbon source Ying_sugar7 rep B; time point 2 -0.4 -0.2 -0.1 N.D. -3.5
carbon source Ying_Nucleobase14 rep B; time point 1 -0.1 -0.1 -0.1 N.D. -3.9
carbon source Ying_sugar7 rep C; time point 2 -0.1 -0.5 -0.2 N.D. -3.4
carbon source Ying_sugar7 rep B; time point 1 -0.0 -0.3 -0.2 N.D. -3.4
carbon source Ying_sugar7 rep B; time point 3 -0.1 -1.1 -1.6 N.D. -1.2
carbon source Ying_Others16 rep C; time point 3 -0.4 -1.2 -2.0 N.D. +0.1
carbon source Ying_AminoAcid20 rep C; time point 3 -1.1 +0.0 -2.0 N.D. -0.4
carbon source Ying_Nucleobase14 rep C; time point 2 -0.3 -0.6 -0.5 N.D. -2.0
carbon source Ying_AminoAcid20 rep A; time point 3 -0.8 -0.1 -2.2 N.D. +0.2
carbon source Ying_AminoAcid20 rep B; time point 2 -0.7 +0.1 -2.0 N.D. -0.3
carbon source Ying_sugar7 rep C; time point 1 -0.1 -0.2 -0.2 N.D. -2.3
carbon source Ying_all64 rep A; time point 3 -0.6 -0.2 -0.7 N.D. -1.3
carbon source Ying_all64 rep B; time point 3 -0.6 -0.4 -0.4 N.D. -1.4
carbon source Ying_AminoAcid20 rep B; time point 3 -1.0 +0.1 -1.9 N.D. +0.3
carbon source Ying_OrganicAcid7 rep A; time point 2 -0.5 +0.1 -0.1 N.D. -2.0
carbon source Ying_all64 rep B; time point 2 -0.4 +0.2 -0.4 N.D. -1.6
carbon source Ying_AminoAcid20 rep A; time point 1 -0.4 -0.0 -1.6 N.D. -0.4
carbon source Ying_all64 rep A; time point 1 -0.1 -0.0 -0.5 N.D. -1.7
carbon source Ying_AminoAcid20 rep C; time point 1 -0.4 +0.1 -1.4 N.D. -0.5
carbon source Ying_AminoAcid20 rep C; time point 2 -0.7 -0.1 -1.5 N.D. +0.0
carbon source Ying_Others16 rep B; time point 2 -0.4 -0.3 -0.9 N.D. -0.6
carbon source Ying_Others16 rep A; time point 3 -0.4 +0.9 +1.6 N.D. -1.9
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