Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_14255	PS417_14260	PS417_14265	PS417_14270	PS417_14275
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.2	-0.8	-0.1	-1.0	-0.1
phage	P. simiae Grant Run MOI 10	-0.3	-1.1	-0.2	+0.1	-0.5
nophagecontrol	Only library	-0.3	-1.3	+0.1	+0.5	-0.5
solid stress	Fraxetin 3 mM; solid stress	-1.3	-0.4	-0.2	+0.2	+0.1
soil	soil sample 5; outgrowth in LB	-0.8	-0.9	+0.2	-0.2	+0.4
carbon source	L-Valine (C)	-0.2	-0.7	-0.6	+0.4	+0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.3	-1.0	-0.5	+0.6	-0.0
carbon source	Carbon source D-Mannitol 10 mM	+0.4	-1.1	-0.2	+0.1	+0.3
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.7	-1.2	-0.1	+0.2	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.3	-1.1	+0.2	-0.3	+0.6
phage	P. simiae ORA MOI 0.1	+0.2	-1.2	-0.1	+0.3	+0.4
soil	soil sample 2; outgrowth in LB	-1.2	+1.0	+0.0	+0.4	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.9	+0.4	-0.2	+0.1	+0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.6	+1.0	-0.0	+0.1	-0.5
stress	L-Lysine 60 mM	+0.8	-1.0	+0.2	+0.1	+0.0
ecofab	LB in EcoFAB_3.5mL	+0.9	-0.8	-0.2	+0.1	+0.3
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+0.6	-1.1	+0.2	+0.2	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+1.0	-0.7	-0.1	+0.3	+0.0
stress	methylglyoxal 0.032 vol%	+0.9	-1.2	-0.1	+0.5	+0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.8	+0.8	+0.3	+0.2	+0.6
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+1.3	-0.1	+0.4	-0.3	-0.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.5	+1.3	+0.4	+0.1	+0.1
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.3	+1.0	+0.6	+0.3	-0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.6	+0.9	-0.5	+0.2	+0.5
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.9	+0.4	-0.1	+0.1	-0.5
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+1.0	-0.0	+0.6	+0.5	-0.2
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.9	+0.2	+0.8	-0.4	+0.3
phage	JP1 MOI 10	+0.1	+1.7	-0.1	+0.2	+0.2
seeds	Growth on radish seeds for 24 hours	+0.9	-0.0	+0.3	+0.3	+0.7
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+1.1	+1.0	+0.2	+0.1	+0.1