Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF2790 and GFF2791 are separated by 116 nucleotidesGFF2791 and GFF2792 are separated by 6 nucleotidesGFF2792 and GFF2793 are separated by 109 nucleotidesGFF2793 and GFF2794 overlap by 4 nucleotides GFF2790 - 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9), at 219,707 to 220,891 GFF2790 GFF2791 - hypothetical protein, at 221,008 to 221,343 GFF2791 GFF2792 - Chaperone protein ClpB (ATP-dependent unfoldase), at 221,350 to 223,971 GFF2792 GFF2793 - Tricarboxylate transport protein TctC, at 224,081 to 225,073 GFF2793 GFF2794 - Molybdopterin synthase catalytic subunit MoaE (EC 2.8.1.12), at 225,070 to 225,546 GFF2794
Group Condition GFF2790 GFF2791 GFF2792 GFF2793 GFF2794
complex community Community=guar; Passage=4 -0.2 -1.5 -0.4 +0.5 +0.1
no phage control no phage control +0.0 -0.6 -0.2 -0.0 -0.4
phage phage_bap4 +0.1 -0.8 -0.3 +0.0 -0.0
no phage control no phage control -0.1 -0.6 -0.4 +0.1 +0.0
phage phage_bap4 -0.2 -0.0 -0.3 -0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 -0.3 +0.0 -0.1 -0.4
phage phage_bap4 -0.1 -0.2 -0.4 -0.0 -0.2
phage phage_bap4 -0.2 +0.0 -0.4 -0.1 -0.3
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.1 -0.3 -0.2 +0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.6 -0.0 +0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.5 -0.2 +0.0 -0.1
phage phage_bap4 -0.2 +0.2 -0.4 -0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.0 -0.6 -0.0 -0.1 +0.3
complex community Community=arabino-guar; Passage=4 +0.2 -0.3 -0.2 +0.0 -0.2
phage phage_bap4 -0.1 +0.2 -0.4 -0.1 -0.1
complex community Community=arabino-guar; Passage=4 +0.1 -0.5 -0.4 +0.3 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 +0.2 -0.0 -0.1 -0.4
complex community Community=Kojac gum; Passage=1 +0.1 -0.4 -0.1 +0.1 +0.1
complex community Community=Kojac gum; Passage=4 +0.1 +0.2 +0.2 -0.3 -0.4
vitamin M9 with Supernatant from Cyptococcus +0.0 +0.3 -0.4 -0.1 -0.0
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.4 -0.2 +0.0 -0.3
complex community Community=Locust bean gum; Passage=4 -0.2 -0.3 +0.2 -0.0 +0.2
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.8 -0.2 -0.1 -0.5
complex community Community=guar; Passage=4 +0.0 +0.2 -0.5 -0.1 +0.5
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 +0.5 +0.0 +0.1 -0.3
complex community Community=guar; Passage=4 +0.2 -0.2 -0.1 +0.1 +0.4
complex community Community=arabino-guar; Passage=4 +0.4 +0.2 -0.4 -0.0 +0.4
complex community Community=Locust bean gum; Passage=4 -0.0 +0.6 +0.2 +0.1 -0.3
complex community Community=Locust bean gum; Passage=4 +0.0 +0.9 -0.1 -0.5 +0.6
complex community Community=arabino-guar; Passage=4 +0.2 +0.7 -0.0 -0.1 +0.7
remove
GFF2790
plot		 remove
GFF2791
plot		 remove
GFF2792		 remove
GFF2793
plot		 remove
GFF2794
plot