Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF2788 and GFF2789 are separated by 92 nucleotidesGFF2789 and GFF2790 are separated by 5 nucleotidesGFF2790 and GFF2791 are separated by 116 nucleotidesGFF2791 and GFF2792 are separated by 6 nucleotides GFF2788 - FIG003461: hypothetical protein, at 218,620 to 219,201 GFF2788 GFF2789 - Peptidyl-tRNA hydrolase ArfB (EC 3.1.1.29), at 219,294 to 219,701 GFF2789 GFF2790 - 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9), at 219,707 to 220,891 GFF2790 GFF2791 - hypothetical protein, at 221,008 to 221,343 GFF2791 GFF2792 - Chaperone protein ClpB (ATP-dependent unfoldase), at 221,350 to 223,971 GFF2792
Group Condition GFF2788 GFF2789 GFF2790 GFF2791 GFF2792
complex community Community=guar; Passage=4 -0.3 +0.1 -0.2 -1.5 -0.4
complex community Community=Locust bean gum; Passage=4 -0.3 -1.0 -0.1 -0.0 -0.2
phage phage_bap4 +0.1 -0.5 +0.1 -0.8 -0.3
no phage control no phage control +0.1 -0.1 -0.1 -0.6 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 -0.3 -0.1 -0.6 -0.0
phage phage_bap4 -0.1 -0.4 -0.2 +0.2 -0.4
phage phage_bap4 -0.1 -0.3 -0.2 -0.0 -0.3
complex community Community=Locust bean gum; Passage=4 +0.1 -0.7 -0.2 -0.3 +0.2
vitamin M9 with Supernatant from Cyptococcus -0.1 -0.5 +0.1 -0.1 -0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.2 +0.1 +0.0 -0.5 -0.1
complex community Community=Kojac gum; Passage=1 +0.1 -0.3 +0.1 -0.4 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 -0.3 -0.0 -0.3 -0.1
vitamin M9 with Supernatant from Cyptococcus -0.0 -0.7 -0.1 +0.4 -0.2
no phage control no phage control +0.2 +0.1 +0.0 -0.6 -0.2
vitamin M9 with Supernatant from Cyptococcus +0.2 -0.0 +0.1 -0.5 -0.2
complex community Community=guar; Passage=4 -0.3 +0.2 +0.2 -0.2 -0.1
phage phage_bap4 -0.0 +0.2 -0.1 +0.2 -0.4
complex community Community=guar; Passage=4 -0.1 +0.3 -0.2 +0.1 -0.3
complex community Community=arabino-guar; Passage=4 +0.1 +0.6 +0.1 -0.5 -0.4
complex community Community=guar; Passage=4 +0.0 +0.2 +0.0 +0.2 -0.5
no phage control no phage control +0.2 +0.3 -0.0 -0.2 -0.2
phage phage_bap4 +0.3 +0.2 -0.1 +0.2 -0.2
vitamin M9 with Supernatant from Cyptococcus +0.1 +0.3 +0.0 +0.3 -0.4
complex community Community=arabino-guar; Passage=4 -0.2 +0.5 +0.4 +0.2 -0.4
complex community Community=arabino-guar; Passage=4 -0.8 +0.5 +0.2 +0.7 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 -0.2 -0.0 +0.6 +0.1
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.1 -0.1 +0.8 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 +0.2 +0.1 +0.5 +0.0
complex community Community=Locust bean gum; Passage=4 -0.0 -0.1 +0.0 +0.9 -0.1
complex community Community=Locust bean gum; Passage=4 -0.3 +0.5 -0.0 +0.6 +0.2
remove
GFF2788
plot
remove
GFF2789
plot
remove
GFF2790
remove
GFF2791
plot
remove
GFF2792
plot