Fitness for 5 genes in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

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500 ntGFF2787 and GFF2788 overlap by 4 nucleotidesGFF2788 and GFF2789 are separated by 18 nucleotidesGFF2789 and GFF2790 overlap by 4 nucleotidesGFF2790 and GFF2791 overlap by 11 nucleotides GFF2787 - Uptake hydrogenase small subunit precursor (EC 1.12.99.6), at 310,013 to 311,215 GFF2787 GFF2788 - Uptake hydrogenase large subunit (EC 1.12.99.6), at 311,212 to 313,005 GFF2788 GFF2789 - Ni,Fe-hydrogenase I cytochrome b subunit, at 313,024 to 313,755 GFF2789 GFF2790 - Hydrogenase maturation protease (EC 3.4.24.-), at 313,752 to 314,348 GFF2790 GFF2791 - Hydrogenase maturation factor hoxO, at 314,338 to 314,742 GFF2791
Group Condition GFF2787 GFF2788 GFF2789 GFF2790 GFF2791
phage LB_plus_SM_buffer with P22_phage 15 MOI -0.3 -0.5 -0.3 -0.8 -1.0
phage Br60_phage 15 MOI -0.3 +0.1 -0.6 -0.3 -0.5
phage LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI -0.2 -0.1 +0.0 -0.6 -0.2
phage LB_plus_SM_buffer with 6H2_phage 0.5 MOI +0.1 +0.2 -0.2 -0.2 -0.7
phage LB_plus_SM_buffer with 6F2_phage 15 MOI +0.1 +0.2 +0.0 -0.3 -0.6
phage LB_plus_SM_buffer with 6C2_phage 15 MOI -0.1 +0.2 -0.2 +0.1 -0.4
phage LB_plus_SM_buffer with 8C2_phage 15 MOI -0.3 +0.4 -0.0 -0.5 -0.1
phage LB_plus_SM_buffer with 6C2_phage 0.25 MOI +0.0 +0.2 -0.1 +0.2 -0.8
phage phi19h1_phage 15 MOI +0.1 +0.3 -0.1 +0.1 -0.7
phage 6F2_phage 15 MOI +0.0 +0.1 +0.3 -0.2 -0.5
phage LB_plus_SM_buffer with FelixO1_phage 0.5 MOI -0.1 +0.0 -0.3 +0.5 -0.4
phage LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI +0.2 +0.3 -0.2 +0.2 -0.4
phage LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI -0.1 +0.4 +0.2 -0.5 +0.2
phage LB_plus_SM_buffer with 6F2_phage 15 MOI +0.3 +0.4 +0.1 -0.4 -0.3
phage LB_plus_SM_buffer with 8C2_phage 15 MOI +0.2 +0.4 +0.1 -0.1 -0.3
phage LB_plus_SM_buffer with 6F2_phage 0.1875 MOI -0.0 +0.3 +0.2 -0.4 +0.3
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.2 +0.2 +0.0 +0.4 -0.4
phage 6F2_phage 15 MOI +0.1 -0.3 +0.2 +0.2 +0.3
phage phi19h1_phage 15 MOI +0.4 -0.1 +0.1 +0.5 -0.4
phage Ffm_phage 10 MOI; agar plate assay +0.0 +0.4 -0.2 +0.0 +0.4
phage LB_plus_SM_buffer with Ffm_phage 0.0001875 MOI -0.1 +0.2 +0.2 -0.1 +0.6
phage Br60_phage 15 MOI +0.1 +0.0 -0.2 +0.4 +0.4
phage LB_plus_SM_buffer with EIP16_phage 0.0875 MOI -0.2 +0.1 +0.0 +0.2 +0.6
phage LB_plus_SM_buffer with FelixO1_phage (wt new) 0.0075 MOI -0.2 +0.3 +0.2 +0.2 +0.4
phage LB_plus_SM_buffer with 6F2_phage 0.001875 MOI -0.2 +0.3 +0.2 +0.1 +0.5
phage LB_plus_SM_buffer with Ffm_phage 0.000001875 MOI -0.2 +0.1 +0.1 +0.2 +0.7
phage 6H2_phage 10 MOI; agar plate assay +0.2 -0.1 +0.6 +0.9 -0.3
phage LB_plus_SM_buffer with EIP30_phage 0.0000875 MOI +0.2 +0.1 +0.4 +0.0 +0.4
lb_plus_sm_buffer LB_plus_SM_buffer +0.2 +0.1 +0.2 +0.2 +0.4
phage LB_plus_SM_buffer with ES18h1_phage 0.75 MOI +0.7 +0.3 -0.1 +0.2 +0.7
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