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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF2770 and GFF2771 are separated by 34 nucleotides
GFF2771 and GFF2772 are separated by 41 nucleotides
GFF2772 and GFF2773 are separated by 74 nucleotides
GFF2773 and GFF2774 are separated by 78 nucleotides
GFF2770 - BUG/TctC family periplasmic protein, at 199,972 to 200,964
GFF2770
GFF2771 - BUG/TctC family periplasmic protein, at 200,999 to 201,970
GFF2771
GFF2772 - Site-specific tyrosine recombinase XerD, at 202,012 to 202,923
GFF2772
GFF2773 - BUG/TctC family periplasmic protein, at 202,998 to 203,972
GFF2773
GFF2774 - Auxin efflux carrier family protein, at 204,051 to 204,995
GFF2774
Group
Condition
GFF2770
GFF2771
GFF2772
GFF2773
GFF2774
complex community
Community=arabino-guar; Passage=4
-0.2
-0.1
-2.9
-0.0
+0.1
complex community
Community=Locust bean gum; Passage=4
-0.2
-0.2
-2.8
+0.0
+0.2
complex community
Community=Locust bean gum; Passage=4
+0.3
+0.0
-1.8
-0.2
-0.4
complex community
Community=guar; Passage=4
-0.0
-0.1
-2.0
-0.1
+0.5
complex community
Community=arabino-guar; Passage=4
+0.2
+0.2
-1.7
+0.1
-0.3
complex community
Community=Locust bean gum; Passage=4
+0.5
-0.0
-1.2
-0.4
-0.3
complex community
Community=guar; Passage=4
+0.1
-0.4
-1.1
-0.1
+0.1
complex community
Community=guar; Passage=4
+0.1
+0.1
-1.2
-0.2
+0.1
complex community
Community=Kojac gum; Passage=4
+0.4
+0.4
-2.3
-0.2
+0.7
complex community
Community=arabino-guar; Passage=4
-0.1
-0.1
-1.0
-0.2
+0.4
complex community
Community=arabino-guar; Passage=4
+0.4
-0.0
-1.6
+0.2
+0.1
complex community
Community=Locust bean gum; Passage=4
-0.0
+0.3
-0.8
-0.4
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.3
+0.2
-0.3
-0.0
-0.2
complex community
Community=guar; Passage=4
+0.2
+0.2
-1.1
-0.1
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.1
+0.0
-0.6
-0.2
+0.0
phage
phage_bap4
-0.1
-0.1
-0.4
+0.0
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.3
-0.0
-0.6
-0.1
-0.0
phage
phage_bap4
-0.0
+0.1
-0.6
-0.1
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.1
+0.0
-0.5
-0.1
+0.1
phage
phage_bap4
-0.0
+0.1
-0.6
+0.1
+0.1
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.2
+0.1
-0.4
-0.1
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.3
-0.1
-0.3
+0.1
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.2
+0.1
-0.4
+0.0
+0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.2
+0.1
-0.5
-0.1
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.1
+0.0
-0.5
+0.1
+0.2
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
+0.1
-0.0
-0.4
+0.2
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.2
-0.0
-0.3
-0.0
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.2
-0.0
-0.4
-0.0
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.2
-0.1
-0.3
+0.0
+0.4
vitamin
M9 with Supernatant from Cyptococcus
-0.1
+0.1
-0.2
+0.2
+0.2
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