Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2766 and GFF2767 are separated by 9 nucleotidesGFF2767 and GFF2768 are separated by 38 nucleotidesGFF2768 and GFF2769 are separated by 92 nucleotidesGFF2769 and GFF2770 are separated by 75 nucleotides GFF2766 - Pentapeptide repeat family protein, at 196,869 to 197,555 GFF2766 GFF2767 - MaoC domain protein dehydratase, at 197,565 to 198,044 GFF2767 GFF2768 - 3-ketoacyl-CoA thiolase 2 [fadN-fadA-fadE operon] (EC 2.3.1.16), at 198,083 to 199,216 GFF2768 GFF2769 - Transcriptional regulator, AcrR family, at 199,309 to 199,896 GFF2769 GFF2770 - BUG/TctC family periplasmic protein, at 199,972 to 200,964 GFF2770
Group Condition GFF2766 GFF2767 GFF2768 GFF2769 GFF2770
complex community Community=arabino-guar; Passage=4 N.D. N.D. -0.6 -0.3 -0.2
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. -0.4 -0.2 -0.1
complex community Community=guar; Passage=4 N.D. N.D. -0.5 -0.0 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. N.D. -0.0 -0.4 +0.1
complex community Community=arabino-guar; Passage=4 N.D. N.D. +0.0 -0.2 -0.1
complex community Community=guar; Passage=4 N.D. N.D. -0.0 -0.4 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. N.D. -0.1 -0.4 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL N.D. N.D. -0.0 -0.3 +0.2
complex community Community=Locust bean gum; Passage=4 N.D. N.D. +0.5 -0.4 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. +0.3 -0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. -0.3 -0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. +0.1 -0.3 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. N.D. +0.0 -0.3 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL N.D. N.D. +0.3 -0.0 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. -0.1 -0.1 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. N.D. +0.1 -0.3 +0.2
phage phage_bap4 N.D. N.D. +0.3 -0.1 -0.0
complex community Community=Locust bean gum; Passage=4 N.D. N.D. -0.5 +0.4 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. +0.2 -0.1 +0.1
phage phage_bap4 N.D. N.D. +0.4 -0.1 +0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. N.D. +0.3 -0.1 +0.2
no phage control no phage control N.D. N.D. +0.3 +0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL N.D. N.D. +0.3 -0.2 +0.2
complex community Community=Kojac gum; Passage=4 N.D. N.D. -0.0 +0.1 +0.4
complex community Community=Locust bean gum; Passage=4 N.D. N.D. +0.6 -0.0 -0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. N.D. +0.2 +0.0 +0.3
complex community Community=arabino-guar; Passage=4 N.D. N.D. +0.6 -0.2 +0.2
complex community Community=arabino-guar; Passage=4 N.D. N.D. +0.2 +0.0 +0.4
complex community Community=Locust bean gum; Passage=4 N.D. N.D. +0.3 -0.1 +0.5
complex community Community=guar; Passage=4 N.D. N.D. +0.6 +0.1 +0.2
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