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Protein
Homologs
Fitness for 5 genes in
Pseudomonas simiae WCS417
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500 nt
PS417_01390 and PS417_01395 overlap by 23 nucleotides
PS417_01395 and PS417_01400 are separated by 26 nucleotides
PS417_01400 and PS417_01405 are separated by 5 nucleotides
PS417_01405 and PS417_01410 overlap by 23 nucleotides
PS417_01390: PS417_01390 - PbsX family transcriptional regulator, at 303,391 to 306,204
_01390
PS417_01395: PS417_01395 - biofilm formation protein PelB, at 306,182 to 309,781
_01395
PS417_01400: PS417_01400 - hypothetical protein, at 309,808 to 310,326
_01400
PS417_01405: PS417_01405 - sugar transporter, at 310,332 to 311,699
_01405
PS417_01410: PS417_01410 - transporter, at 311,677 to 312,672
_01410
Group
Condition
PS417
_01390
PS417
_01395
PS417
_01400
PS417
_01405
PS417
_01410
ecofab
LB in EcoFAB_3.5mL
-1.9
-1.7
-0.9
-2.1
-1.7
stress
LB_noSalt with Chloride 1100 mM
+1.5
+1.5
+1.2
+1.3
+1.4
liquid stress
Scopoletin 2 mM; liquid stress
+1.4
+1.4
+1.2
+1.7
+1.4
liquid stress
Fraxetin 1 mM; liquid stress
+1.3
+1.5
+1.6
+1.5
+1.5
phage
P. simiae Grant Run MOI 10
+0.3
+1.8
+1.7
+2.0
+1.6
liquid stress
Fraxetin 2 mM; liquid stress
+1.3
+1.6
+1.2
+1.7
+1.7
phage
P. simiae Grant Run MOI 10
+0.3
+1.9
+2.3
+1.6
+1.3
stress
LB_noSalt with Chloride 1100 mM
+1.6
+1.7
+1.6
+1.4
+1.5
liquid stress
80% Methanol 3 mM; liquid stress
+1.6
+1.6
+1.6
+1.7
+1.4
nophagecontrol
Only library
+1.8
+1.8
+1.5
+1.8
+1.5
liquid stress
80% Methanol 2 mM; liquid stress
+1.6
+1.6
+1.7
+1.7
+1.7
liquid stress
Scopoletin 2 mM; liquid stress
+1.6
+1.7
+1.4
+2.1
+1.9
liquid stress
80% Methanol 2 mM; liquid stress
+1.6
+1.7
+1.7
+1.9
+2.0
stress
Dimethyl Sulfoxide 4 vol%
+1.7
+1.9
+1.8
+1.8
+1.9
liquid stress
Fraxetin 2 mM; liquid stress
+1.7
+1.8
+1.8
+2.0
+1.8
liquid stress
80% Methanol 2 mM; liquid stress
+1.6
+1.7
+2.0
+2.0
+1.9
phage
JP1 MOI 1
+0.9
+2.4
+2.2
+2.4
+1.5
liquid stress
Fraxetin 2 mM; liquid stress
+1.8
+1.9
+1.9
+1.9
+2.0
liquid stress
Fraxetin 2 mM; liquid stress
+1.7
+1.8
+1.8
+2.2
+2.1
phage
JP1 MOI 10
+0.9
+2.4
+2.5
+2.4
+1.7
phage
JP1 MOI 0.1
+1.2
+2.4
+2.3
+2.3
+1.8
phage
JP1 MOI 1
+1.0
+2.4
+2.6
+2.5
+1.6
liquid stress
Scopoletin 2 mM; liquid stress
+1.8
+2.0
+2.2
+2.2
+2.1
liquid stress
80% Methanol 2 mM; liquid stress
+2.1
+2.2
+2.0
+2.4
+2.2
stress
1-ethyl-3-methylimidazolium chloride 200 mM
+2.1
+2.2
+2.2
+2.1
+2.3
phage
JP1 MOI 10
+1.5
+2.6
+2.4
+2.6
+2.2
stress
LB_noSalt with Chloride 500 mM
+2.9
+3.0
+3.1
+2.7
+2.9
stress
Choline chloride 300 mM
+3.1
+2.9
+3.2
+2.9
+2.8
stress
LB_noSalt with Chloride 500 mM
+3.1
+3.1
+3.1
+3.0
+3.0
stress
Dimethyl Sulfoxide 5 vol%
+3.0
+3.2
+3.6
+3.4
+3.2
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PS417_01390
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PS417_01395
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PS417_01400
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PS417_01405
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PS417_01410
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