Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2746 and GFF2747 are separated by 76 nucleotidesGFF2747 and GFF2748 are separated by 183 nucleotidesGFF2748 and GFF2749 are separated by 2 nucleotidesGFF2749 and GFF2750 overlap by 1 nucleotides GFF2746 - FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8), at 180,475 to 180,999 GFF2746 GFF2747 - 17 kDa surface antigen, at 181,076 to 181,576 GFF2747 GFF2748 - Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23), at 181,760 to 182,206 GFF2748 GFF2749 - hypothetical protein, at 182,209 to 182,685 GFF2749 GFF2750 - Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5), at 182,685 to 183,908 GFF2750
Group Condition GFF2746 GFF2747 GFF2748 GFF2749 GFF2750
complex community Community=guar; Passage=4 -0.2 -0.4 N.D. -0.8 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.6 -0.1 N.D. -0.4 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.6 -0.2 N.D. -0.2 N.D.
complex community Community=guar; Passage=4 -0.8 -0.3 N.D. +0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 -0.5 N.D. -0.0 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL -0.4 -0.3 N.D. +0.0 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.5 +0.1 N.D. -0.2 N.D.
complex community Community=Locust bean gum; Passage=4 -0.8 -0.1 N.D. +0.3 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.5 +0.1 N.D. -0.2 N.D.
complex community Community=Kojac gum; Passage=4 +0.3 -1.0 N.D. +0.2 N.D.
complex community Community=arabino-guar; Passage=4 -0.3 +0.0 N.D. -0.3 N.D.
complex community Community=Locust bean gum; Passage=4 +0.0 -0.7 N.D. +0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.5 +0.0 N.D. -0.0 N.D.
complex community Community=arabino-guar; Passage=4 +0.2 -0.5 N.D. -0.1 N.D.
complex community Community=guar; Passage=4 +0.2 -0.2 N.D. -0.5 N.D.
vitamin M9 with Supernatant from Cyptococcus -0.4 +0.1 N.D. +0.1 N.D.
vitamin M9 with Supernatant from Cyptococcus +0.2 +0.1 N.D. -0.4 N.D.
complex community Community=arabino-guar; Passage=4 -0.1 +0.3 N.D. -0.3 N.D.
complex community Community=Locust bean gum; Passage=4 +0.6 -0.3 N.D. -0.3 N.D.
complex community Community=Locust bean gum; Passage=1 +0.3 -0.4 N.D. +0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.4 +0.2 N.D. +0.3 N.D.
no phage control no phage control -0.2 -0.0 N.D. +0.3 N.D.
phage phage_bap4 +0.3 -0.2 N.D. -0.0 N.D.
vitamin M9 with Supernatant from Cyptococcus +0.3 -0.1 N.D. -0.1 N.D.
complex community Community=guar; Passage=4 -0.4 +0.1 N.D. +0.5 N.D.
complex community Community=arabino-guar; Passage=4 -0.2 +0.7 N.D. -0.2 N.D.
phage phage_bap4 +0.3 -0.1 N.D. +0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.3 +0.1 N.D. -0.0 N.D.
complex community Community=Locust bean gum; Passage=4 +0.3 +0.0 N.D. +0.2 N.D.
phage phage_bap4 +0.3 +0.2 N.D. +0.1 N.D.
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