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Cofit
Protein
Homologs
Fitness for 5 genes in
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF2746 and GFF2747 are separated by 358 nucleotides
GFF2747 and GFF2748 are separated by 265 nucleotides
GFF2748 and GFF2749 are separated by 476 nucleotides
GFF2749 and GFF2750 are separated by 196 nucleotides
GFF2746 - Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1), at 265,226 to 266,857
GFF2746
GFF2747 - hypothetical protein, at 267,216 to 267,356
GFF2747
GFF2748 - Putative membrane protein, at 267,622 to 268,269
GFF2748
GFF2749 - Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10), at 268,746 to 271,424
GFF2749
GFF2750 - Thymidine kinase (EC 2.7.1.21), at 271,621 to 272,238
GFF2750
Group
Condition
GFF2746
GFF2747
GFF2748
GFF2749
GFF2750
phage
LB_plus_SM_buffer with FelixO1_phage 0.05 MOI
-0.2
N.D.
-0.5
-0.5
-1.0
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
-0.3
N.D.
-0.5
-0.3
-0.8
phage
LB_plus_SM_buffer with FelixO1_phage 0.5 MOI
-0.5
N.D.
+0.1
-0.5
-0.9
phage
LB_plus_SM_buffer with ES18h1_phage 0.75 MOI
+0.1
N.D.
-1.8
+0.1
-0.2
phage
LB_plus_SM_buffer with EIP16_phage 8.75 MOI
-0.3
N.D.
-0.2
-0.4
-0.7
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
-0.3
N.D.
-0.2
-0.3
-0.8
phage
LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI
-0.3
N.D.
-0.9
-0.2
+0.0
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
-0.2
N.D.
-0.1
-0.1
-0.9
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI
-0.3
N.D.
+0.4
-0.2
-1.3
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
-0.2
N.D.
-0.1
-0.3
-0.7
phage
LB_plus_SM_buffer with EIP16_phage 0.0875 MOI
+0.1
N.D.
-0.1
-0.1
-0.7
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.075 MOI
-0.1
N.D.
+0.4
-0.3
-0.8
micoeukaryotes
Dictyostellum sp.mixed culture-2
+0.1
N.D.
-0.6
-0.1
+0.1
phage
LB_plus_SM_buffer with EIP16_phage 0.875 MOI
-0.0
N.D.
+0.3
-0.1
-0.5
phage
LB_plus_SM_buffer with Br60_phage 0.00005 MOI
+0.3
N.D.
-0.8
+0.2
+0.0
phage
LB_plus_SM_buffer with Ffm_phage 15 MOI
-0.1
N.D.
-0.7
+0.2
+0.4
phage
6H2_phage 10 MOI; agar plate assay
+0.7
N.D.
-0.5
-0.4
-0.0
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
-0.1
N.D.
-0.5
+0.2
+0.3
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
-0.2
N.D.
-0.8
+0.4
+0.5
micoeukaryotes
Acanthamoeba sp., muxed culture-1
+0.5
N.D.
-0.3
-0.1
+0.2
phage
Ffm_phage 10 MOI; agar plate assay
+0.5
N.D.
-0.8
+0.6
+0.1
phage
LB_plus_SM_buffer with 6F2_phage 15 MOI
+0.1
N.D.
-0.2
+0.3
+0.4
phage
LB_plus_SM_buffer with P22_phage 15 MOI
-0.4
N.D.
-0.4
+0.4
+1.0
phage
6F2_phage 15 MOI
-0.2
N.D.
+0.2
+0.2
+0.7
phage
phi19h1_phage 15 MOI
+0.4
N.D.
+0.4
+0.2
-0.1
phage
LB_plus_SM_buffer with 6F2_phage 1.875 MOI
+0.1
N.D.
+0.2
+0.1
+0.6
phage
6F2_phage 15 MOI
-0.1
N.D.
+0.8
-0.0
+0.4
phage
LB_plus_SM_buffer with Br60_phage 0.000005 MOI
+0.4
N.D.
+0.1
+0.2
+0.4
phage
LB_plus_SM_buffer with Br60_phage 0.0005 MOI
+2.0
N.D.
-0.2
-0.1
+0.3
phage
LB_plus_SM_buffer with 6F2_phage 0.1875 MOI
+0.5
N.D.
+0.8
+0.2
+0.7
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