Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 552 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PS417_14000	PS417_14005	PS417_14010	PS417_14015	PS417_14020
solid stress	Fraxetin 3 mM; solid stress	-0.5	-0.7	-0.3	-1.0	-0.5
supernatant	Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x	-0.3	-1.7	-0.1	-0.3	-0.2
stress	methylglyoxal 0.032 vol%	-0.3	-0.3	-0.6	-0.7	-0.6
supernatant	LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x	-0.2	-1.8	+0.2	-0.3	-0.1
stress	Doxycycline hyclate 0.001 mg/ml	-0.3	-0.2	+0.0	-0.9	-0.8
carbon source	octanoate (C)	-0.0	-0.9	-0.1	-0.7	-0.3
solid stress	Fraxetin 3 mM; solid stress	-0.3	-0.3	-0.3	-0.6	-0.5
solid stress	Fraxetin 3 mM; solid stress	-0.3	-0.2	-0.2	-0.7	-0.5
carbon source	octanoate (C)	-0.3	-0.8	-0.0	-0.5	-0.2
soil	soil sample 6; outgrowth in LB	-0.2	-0.9	-0.0	-0.4	-0.4
solid stress	Fraxetin 3 mM; solid stress	-0.2	-0.3	-0.3	-0.7	-0.2
soil	soil sample 4; outgrowth in LB	+0.1	-0.7	+0.1	-1.0	-0.1
motility	inner cut, LB soft agar motility assay	-0.0	-0.4	-0.2	-0.8	-0.2
soil	soil sample 7; outgrowth in LB	+0.2	-0.8	-0.4	-0.2	-0.4
soil	soil sample 5; outgrowth in LB	-0.1	-1.0	-0.7	+0.3	+0.1
phage	P. simiae OR1 MOI 0.1	-0.1	+0.1	-0.7	-0.4	-0.4
carbon source	2'-Deoxyinosine 5 mM (C)	-0.0	-0.8	+0.2	-0.7	-0.0
soil	soil sample 3; outgrowth in LB	+0.2	-1.0	-0.4	+0.1	-0.2
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	-0.1	-0.7	+0.2	-0.2	-0.3
carbon source	2'-Deoxyinosine 5 mM (C)	-0.2	-0.5	-0.1	-0.6	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.1	+0.2	-0.1	-0.9	-0.4
phage	JP1 MOI 10	+0.1	-0.2	-0.4	-0.6	+0.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.2	-0.6	-0.3	+0.6	-0.2
soil	soil sample 8; outgrowth in LB	+0.0	-0.6	-0.0	+0.4	-0.5
soil	soil sample 2; outgrowth in LB	-0.2	-0.6	-0.3	+0.6	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.0	+0.4	+0.2	-0.4	-0.7
rhizosphere	rhizosphere sample 1; outgrowth in LB	+0.1	-0.7	-0.2	+0.6	+0.2
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.3	+0.1	+0.3	+0.6	-0.3
root	root sample 6; outgrowth in LB	+0.3	-0.5	+0.3	+1.2	-0.3
stress	Neomycin 0.04 mg/ml	+0.3	+0.5	+0.4	+0.9	+0.8