Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2721 and GFF2722 are separated by 125 nucleotidesGFF2722 and GFF2723 are separated by 128 nucleotidesGFF2723 and GFF2724 are separated by 51 nucleotidesGFF2724 and GFF2725 are separated by 13 nucleotides GFF2721 - ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines), at 153,841 to 154,512 GFF2721 GFF2722 - Transcriptional regulator, LysR family, at 154,638 to 155,594 GFF2722 GFF2723 - Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit, at 155,723 to 156,556 GFF2723 GFF2724 - FIG01220323: hypothetical protein, at 156,608 to 157,678 GFF2724 GFF2725 - Isochorismatase (EC 3.3.2.1), at 157,692 to 158,228 GFF2725
Group Condition GFF2721 GFF2722 GFF2723 GFF2724 GFF2725
complex community Community=Locust bean gum; Passage=4 -0.0 -0.2 -1.0 -0.1 -1.9
complex community Community=arabino-guar; Passage=4 -0.4 +0.3 -0.1 -0.1 -1.3
complex community Community=Locust bean gum; Passage=4 -0.1 +0.4 -1.1 +0.1 -0.9
complex community Community=arabino-guar; Passage=4 +0.2 -0.3 +0.4 +0.1 -1.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 -0.1 +0.0 +0.1 -1.0
no phage control no phage control -0.0 -0.0 -0.2 +0.1 -0.6
complex community Community=Locust bean gum; Passage=4 -0.4 +0.1 +0.1 +0.1 -0.8
complex community Community=guar; Passage=4 -0.1 +0.0 -0.1 -0.0 -0.6
complex community Community=guar; Passage=4 +0.2 +0.4 +0.2 +0.0 -1.3
complex community Community=guar; Passage=4 -0.2 -0.2 +0.2 +0.2 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.1 -0.3 -0.1 +0.3
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.0 -0.2 -0.1 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.2 -0.3 -0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 +0.2 +0.2 +0.0 -0.4
phage phage_bap4 +0.1 +0.1 +0.3 +0.2 -0.6
phage phage_bap4 -0.1 +0.2 +0.3 -0.1 -0.2
complex community Community=guar; Passage=4 -0.0 +0.2 +0.4 -0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 +0.1 -0.2 +0.0 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 -0.0 -0.2 +0.0 +0.5
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.2 +0.0 +0.1 -0.0 +0.4
vitamin M9 with Supernatant from Cyptococcus +0.1 +0.0 -0.2 +0.0 +0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.4 +0.1 +0.1 +0.1 +0.6
complex community Community=arabino-guar; Passage=4 -0.0 -0.1 +0.0 +0.0 +0.5
vitamin M9 with Supernatant from Cyptococcus -0.2 +0.1 +0.1 +0.1 +0.5
phage phage_bap4 -0.0 +0.1 +0.3 +0.2 +0.1
complex community Community=Kojac gum; Passage=1 -0.1 +0.2 +0.0 +0.1 +0.5
complex community Community=Locust bean gum; Passage=4 +0.3 +0.1 +0.5 -0.0 +0.2
complex community Community=Kojac gum; Passage=4 -0.4 -0.2 +0.8 -0.0 +0.9
phage phage_bap4 -0.0 +0.2 +0.2 +0.1 +0.6
complex community Community=arabino-guar; Passage=4 -0.1 +0.4 +0.2 +0.3 +0.7
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