Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2712 and GFF2713 are separated by 31 nucleotidesGFF2713 and GFF2714 are separated by 1907 nucleotidesGFF2714 and GFF2715 are separated by 124 nucleotidesGFF2715 and GFF2716 are separated by 5 nucleotides GFF2712 - no description, at 143,542 to 144,189 GFF2712 GFF2713 - Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily, at 144,221 to 145,741 GFF2713 GFF2714 - 2-ketogluconate utilization repressor PtxS, at 147,649 to 148,674 GFF2714 GFF2715 - 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43), at 148,799 to 149,782 GFF2715 GFF2716 - 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45), at 149,788 to 150,741 GFF2716
Group Condition GFF2712 GFF2713 GFF2714 GFF2715 GFF2716
complex community Community=Locust bean gum; Passage=4 +0.0 -0.2 -3.7 -2.2 -0.9
complex community Community=arabino-guar; Passage=4 +0.4 +0.2 -3.9 -1.6 -1.7
complex community Community=guar; Passage=4 -1.1 +0.2 -2.7 -0.9 -1.5
complex community Community=arabino-guar; Passage=4 -1.3 +0.0 -2.4 -1.2 -1.0
complex community Community=Kojac gum; Passage=4 +0.6 -0.2 -4.5 -1.3 -0.3
complex community Community=Locust bean gum; Passage=4 +0.2 -0.5 -3.0 -1.5 -0.2
complex community Community=guar; Passage=4 +0.1 -0.3 -2.9 -1.2 -0.4
complex community Community=Locust bean gum; Passage=4 -0.4 -1.0 -3.4 +0.2 +0.8
complex community Community=guar; Passage=4 +0.1 -0.3 -1.8 -1.1 -0.2
complex community Community=arabino-guar; Passage=4 -0.6 -0.6 -2.5 +0.1 +0.7
complex community Community=arabino-guar; Passage=4 +0.3 +0.3 -1.9 -1.0 -0.0
complex community Community=guar; Passage=4 -0.6 -0.5 -1.7 +0.1 +0.5
complex community Community=Locust bean gum; Passage=4 +0.7 +0.4 -2.6 -0.9 +0.6
vitamin M9 with Supernatant from Cyptococcus -0.3 -0.0 -0.0 -0.6 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 -0.1 -0.9 +0.0 -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 -0.2 -0.6 -0.0 -0.4
vitamin M9 with Supernatant from Cyptococcus -0.2 +0.2 -0.7 +0.0 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 +0.1 -0.3 -0.6 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 +0.0 -0.7 +0.2 -0.4
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.1 -0.8 +0.1 -0.2
no phage control no phage control +0.1 -0.0 -0.4 -0.7 +0.3
vitamin M9 with Supernatant from Cyptococcus -0.3 +0.2 -0.7 +0.2 -0.1
complex community Community=Kojac gum; Passage=1 +0.1 -0.1 -0.3 -0.7 +0.3
phage phage_bap4 -0.0 +0.2 +0.3 -0.6 +0.4
no phage control no phage control +0.4 +0.2 -0.2 -0.3 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 +0.2 +0.4 -0.0 +0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 +0.2 +0.4 -0.1 +0.5
phage phage_bap4 +0.3 +0.2 +0.2 +0.1 +1.0
phage phage_bap4 +0.3 +0.2 +0.1 +0.7 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 +0.0 +0.6 +0.7 +0.5
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