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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF2706 and GFF2707 are separated by 82 nucleotides
GFF2707 and GFF2708 overlap by 4 nucleotides
GFF2708 and GFF2709 are separated by 88 nucleotides
GFF2709 and GFF2710 are separated by 37 nucleotides
GFF2706 - hypothetical protein, at 2,726,467 to 2,726,763
GFF2706
GFF2707 - hypothetical protein, at 2,726,846 to 2,727,727
GFF2707
GFF2708 - hypothetical protein, at 2,727,724 to 2,729,190
GFF2708
GFF2709 - hypothetical protein, at 2,729,279 to 2,731,288
GFF2709
GFF2710 - Type II restriction enzyme PaeR7I (EC 3.1.21.4), at 2,731,326 to 2,732,075
GFF2710
Group
Condition
GFF2706
GFF2707
GFF2708
GFF2709
GFF2710
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
-0.4
+0.1
-0.2
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.3
+0.1
+0.1
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
+0.1
-0.0
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.1
+0.1
-0.0
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.1
+0.0
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.1
+0.0
+0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
+0.1
+0.1
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.0
+0.1
+0.1
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.2
+0.0
+0.4
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.1
+0.1
+0.1
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.3
+0.2
+0.2
+0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
+0.3
+0.2
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
+0.2
+0.1
+0.1
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.3
+0.1
+0.2
+0.2
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.2
+0.3
+0.1
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.3
+0.3
+0.2
+0.1
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.3
+0.4
+0.2
+0.1
+0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.3
+0.2
+0.3
+0.3
+0.2
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