Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_13770	PS417_13775	PS417_13780	PS417_13785	PS417_13790
stress	Polymyxin B sulfate 0.006 mg/ml	-1.0	-1.3	-2.9	-3.0	-4.5
stress	Neomycin 0.04 mg/ml	-1.3	-1.1	-2.3	-2.7	-2.9
stress	Gentamicin 0.008 mg/ml	-0.9	-0.4	-2.0	-1.0	-3.4
soil	soil sample 3; outgrowth in LB	-0.7	-0.3	-0.2	-0.5	-4.8
soil	soil sample 5; outgrowth in LB	-0.0	-1.0	-0.0	-0.9	-4.1
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.3	-0.2	-1.3	-1.7	-3.0
stress	Benzalkonium Chloride 0.012 mg/ml	-0.6	-0.4	-0.8	-0.8	-3.1
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.5	+0.2	-0.3	-1.1	-3.9
stress	Aluminum chloride 4 mM	-0.1	-0.1	-0.6	-1.3	-3.5
soil	soil sample 7; outgrowth in LB	-0.1	-0.4	-0.4	-1.1	-3.4
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.2	-0.5	-0.7	-0.8	-3.4
soil	soil sample 4; outgrowth in LB	-0.2	-0.3	-0.1	-0.2	-4.4
soil	soil sample 2; outgrowth in LB	-0.7	-0.8	-0.3	-0.3	-2.7
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.4	-0.2	-1.0	+0.2	-3.8
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+0.3	+0.0	-0.9	-1.1	-2.5
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+0.3	-0.0	-0.7	-1.1	-2.6
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+0.0	-0.2	-0.9	-0.9	-2.2
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.0	+0.1	-0.7	-1.1	-2.3
rhizosphere	rhizosphere sample 2; outgrowth in LB	-0.7	-0.8	+0.4	-0.2	-2.5
soil	soil sample 6; outgrowth in LB	+0.4	-0.0	-0.5	-0.0	-3.8
stress	Doxycycline hyclate 0.001 mg/ml	-0.6	-0.2	-0.1	-1.2	-1.8
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.2	-0.4	-0.6	-0.6	-2.4
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.0	-0.2	-0.5	-1.0	-2.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5	-0.1	-0.1	-1.3	-1.5
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	-0.1	-0.2	-0.1	-0.2	-2.9
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	-0.4	-0.4	+0.1	+0.1	-2.7
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	+0.1	-0.4	-0.0	-0.6	-2.5
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.1	-0.3	+0.1	+0.4	-3.1
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.3	+0.1	-0.1	-1.1	-2.0
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.4	-0.4	-0.1	+1.0	-1.6