Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_13765	PS417_13770	PS417_13775	PS417_13780	PS417_13785
stress	Polymyxin B sulfate 0.006 mg/ml	-0.6	-1.0	-1.3	-2.9	-3.0
stress	Neomycin 0.04 mg/ml	-0.7	-1.3	-1.1	-2.3	-2.7
stress	Gentamicin 0.008 mg/ml	-0.6	-0.9	-0.4	-2.0	-1.0
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.3	+0.3	-0.2	-1.3	-1.7
stress	Benzalkonium Chloride 0.012 mg/ml	-0.1	-0.6	-0.4	-0.8	-0.8
stress	Cisplatin 0.01 mg/ml	-0.1	-0.6	-0.1	-0.3	-1.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.3	-0.5	-0.1	-0.1	-1.3
phage	P. simiae OR1 MOI 0.1	-0.3	+0.2	-0.4	-0.8	-0.9
stress	Aluminum chloride 4 mM	-0.1	-0.1	-0.1	-0.6	-1.3
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.2	+0.0	-0.2	-0.9	-0.9
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.4	+0.3	+0.0	-0.9	-1.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.3	-0.1	-0.9	-0.5	-0.1
stress	Doxycycline hyclate 0.001 mg/ml	+0.2	-0.6	-0.2	-0.1	-1.2
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+0.0	-0.0	+0.1	-0.7	-1.1
soil	soil sample 2; outgrowth in LB	+0.3	-0.7	-0.8	-0.3	-0.3
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.1	+0.2	-0.5	-0.7	-0.8
soil	soil sample 7; outgrowth in LB	+0.4	-0.1	-0.4	-0.4	-1.1
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.1	+0.3	-0.0	-0.7	-1.1
soil	soil sample 5; outgrowth in LB	+0.4	-0.0	-1.0	-0.0	-0.9
soil	soil sample 3; outgrowth in LB	+0.3	-0.7	-0.3	-0.2	-0.5
rhizosphere	rhizosphere sample 1; outgrowth in LB	+0.5	-0.5	+0.2	-0.3	-1.1
rhizosphere	rhizosphere sample 2; outgrowth in LB	+0.5	-0.7	-0.8	+0.4	-0.2
agar plate interaction control	Taped volatile agar plate with no fungus	+0.2	-0.2	-0.2	-0.7	+1.1
carbon source	2'-Deoxyinosine 5 mM (C)	+0.4	-0.9	+0.2	+0.2	+0.5
soil	soil sample 8; outgrowth in LB	+0.6	+0.2	-0.6	-0.1	+0.5
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.1	+0.4	-0.4	-0.1	+1.0
seeds	Growth on radish seeds for 72 hours	+0.5	+0.5	+0.3	-0.9	+0.6
stress	methylglyoxal 0.032 vol%	-0.1	-0.0	-0.2	+0.6	+1.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.1	+0.5	+0.8	+0.5	-0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	-0.1	+0.1	-0.1	+1.7	+1.1