Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_01365	PS417_01370	PS417_01375	PS417_01380	PS417_01385
phage	P. simiae ORA MOI 1	N.D.	-0.4	-0.9	-0.4	-0.5
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	N.D.	-0.2	-0.6	-0.8	-0.3
carbon source	2'-Deoxyinosine 5 mM (C)	N.D.	+0.2	-1.3	-0.5	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.1	-1.0	+0.2	-0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.1	-1.0	+0.4	-0.6
phage	JP1 MOI 0.1	N.D.	+0.2	-1.0	+0.4	-0.4
phage	P. simiae OR Antrim MOI 10	N.D.	-0.1	-0.5	+0.8	-0.6
seeds	Growth on radish seeds for 24 hours	N.D.	+0.0	+0.9	-0.4	-0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.3	-0.4	+0.7	-0.5
phage	P. simiae OR Antrim MOI 10	N.D.	+0.0	+0.8	+0.4	-0.9
phage	P. simiae OR Antrim MOI 1	N.D.	+0.0	+0.6	+0.5	-0.7
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	N.D.	+0.3	+0.6	-0.8	+0.4
root	root sample 6; outgrowth in LB	N.D.	+0.5	+1.0	-0.3	-0.7
phage	P. simiae OR Antrim MOI 1	N.D.	-0.2	+0.9	+0.6	-0.6
agar plate interaction control	Taped volatile agar plate with no fungus	N.D.	-0.4	+1.2	+0.1	-0.2
soil	soil sample 2; outgrowth in LB	N.D.	+0.1	+1.0	-0.5	+0.0
seeds	Growth on radish seeds for 72 hours	N.D.	-0.2	+0.7	+0.6	-0.2
phage	P. simiae OR Antrim MOI 0.1	N.D.	+0.3	+0.4	+0.6	-0.4
carbon source	L-Valine (C)	N.D.	+0.3	-0.5	+0.6	+0.6
phage	JP1 MOI 1	N.D.	-0.3	+0.6	+0.4	+0.3
phage	P. simiae Grant Run MOI 0.1	N.D.	+0.2	+1.0	+0.5	-0.6
stress	Dimethyl Sulfoxide 5 vol%	N.D.	-0.1	+0.2	-0.4	+1.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	N.D.	-0.2	+0.3	+0.6	+0.8
liquid stress	Fraxetin 2 mM; liquid stress	N.D.	-0.1	+0.5	+0.4	+0.8
liquid stress	80% Methanol 2 mM; liquid stress	N.D.	-0.1	+0.5	+0.4	+0.9
stress	Choline chloride 300 mM	N.D.	+0.0	+0.1	+0.2	+1.4
soil	soil sample 8; outgrowth in LB	N.D.	+0.4	+0.2	+0.6	+0.6
soil	soil sample 6; outgrowth in LB	N.D.	+0.4	+0.8	+0.7	+0.0
seeds	Growth on radish seeds for 72 hours	N.D.	-0.3	+1.5	+1.1	-0.5
stress	LB_noSalt with Chloride 500 mM	N.D.	+0.2	+0.6	+0.2	+0.9