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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF2689 and GFF2690 overlap by 4 nucleotides
GFF2690 and GFF2691 overlap by 4 nucleotides
GFF2691 and GFF2692 are separated by 190 nucleotides
GFF2692 and GFF2693 are separated by 182 nucleotides
GFF2689 - CzcABC family efflux RND transporter, transmembrane protein, at 2,709,005 to 2,712,241
GFF2689
GFF2690 - CzcABC family efflux RND transporter, membrane fusion protein, at 2,712,238 to 2,713,392
GFF2690
GFF2691 - CzcABC family efflux RND transporter, outer membrane protein, at 2,713,389 to 2,714,657
GFF2691
GFF2692 - hypothetical protein, at 2,714,848 to 2,714,979
GFF2692
GFF2693 - Probable NreB protein, at 2,715,162 to 2,716,499
GFF2693
Group
Condition
GFF2689
GFF2690
GFF2691
GFF2692
GFF2693
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.1
-0.0
+0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
+0.1
+0.1
-0.5
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
+0.1
+0.1
-0.3
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.1
+0.1
-0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.1
+0.0
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.0
+0.1
+0.2
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
+0.1
+0.1
+0.1
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.0
-0.0
+0.4
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.1
+0.1
+0.2
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
+0.1
+0.1
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.0
+0.1
+0.2
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
+0.2
+0.2
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
+0.1
+0.0
+0.5
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.1
+0.1
+0.3
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.1
+0.1
+0.5
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
+0.1
-0.0
+0.6
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.1
+0.1
+0.6
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
+0.2
+0.3
+0.8
+0.3
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