Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2684 and GFF2685 are separated by 29 nucleotidesGFF2685 and GFF2686 are separated by 140 nucleotidesGFF2686 and GFF2687 are separated by 64 nucleotidesGFF2687 and GFF2688 are separated by 122 nucleotides GFF2684 - Enoyl-CoA hydratase (EC 4.2.1.17), at 107,848 to 108,810 GFF2684 GFF2685 - DNA internalization-related competence protein ComEC/Rec2, at 108,840 to 111,308 GFF2685 GFF2686 - Large protein containing transglutaminase-like domain, at 111,449 to 114,976 GFF2686 GFF2687 - Protein containing domains DUF404, DUF407, DUF403, at 115,041 to 117,776 GFF2687 GFF2688 - Glutamine ABC transporter, substrate-binding protein GlnH, at 117,899 to 118,723 GFF2688
Group Condition GFF2684 GFF2685 GFF2686 GFF2687 GFF2688
complex community Community=arabino-guar; Passage=4 +0.4 -0.7 -0.1 +0.1 -2.7
complex community Community=Locust bean gum; Passage=4 -0.2 +0.2 -0.0 -0.8 -1.9
complex community Community=arabino-guar; Passage=4 +0.6 -0.3 -0.1 +0.0 -2.3
complex community Community=Kojac gum; Passage=4 -1.0 +0.3 +0.3 -0.5 -1.0
complex community Community=guar; Passage=4 +0.5 -0.3 -0.1 +0.6 -2.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 +0.2 -0.0 -0.0 -1.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.0 -0.1 +0.0 +0.1 -1.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 +0.1 -0.0 +0.3 -1.2
complex community Community=arabino-guar; Passage=4 +0.3 -0.6 +0.2 +0.2 -0.9
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 +0.1 +0.1 +0.3 -0.8
complex community Community=Locust bean gum; Passage=4 +0.1 +0.9 +0.0 -0.2 -1.3
vitamin M9 with Supernatant from Cyptococcus -0.4 +0.2 +0.1 +0.2 -0.3
complex community Community=guar; Passage=4 -0.1 +0.3 -0.2 -0.4 +0.2
complex community Community=guar; Passage=4 +0.1 +0.3 +0.1 -0.1 -0.6
vitamin M9 with Supernatant from Cyptococcus +0.3 +0.2 +0.1 +0.1 -0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 +0.0 +0.1 +0.2 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 +0.6 +0.1 +0.2 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 +0.5 +0.0 +0.3 -0.4
complex community Community=Locust bean gum; Passage=4 -0.1 -0.8 -0.1 -0.2 +1.5
complex community Community=Locust bean gum; Passage=1 -0.2 -0.1 -0.0 +0.2 +0.5
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.1 +0.1 +0.1 +0.2 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 +0.2 -0.0 +0.3 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 +0.3 +0.1 +0.1 +0.7
phage phage_bap4 +0.2 +0.2 +0.1 +0.1 +0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.0 +0.5 -0.0 +0.1 +0.5
complex community Community=guar; Passage=4 -0.1 +0.0 +0.2 +0.1 +0.9
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 +0.2 +0.1 +0.2 +0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 +0.3 +0.1 +0.3 +0.6
no phage control no phage control +0.2 +0.2 +0.0 +0.2 +0.9
complex community Community=arabino-guar; Passage=4 +1.1 -0.2 +0.1 -0.0 +1.2
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