Fitness for 5 genes in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

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500 ntGFF2678 and GFF2679 are separated by 89 nucleotidesGFF2679 and GFF2680 are separated by 147 nucleotidesGFF2680 and GFF2681 overlap by 4 nucleotidesGFF2681 and GFF2682 are separated by 148 nucleotides GFF2678 - Thiol peroxidase, Tpx-type (EC 1.11.1.15), at 201,202 to 201,708 GFF2678 GFF2679 - Transcriptional repressor protein TyrR, at 201,798 to 203,339 GFF2679 GFF2680 - Membrane protein YcjF, at 203,487 to 204,548 GFF2680 GFF2681 - Conserved protein YcjX with nucleoside triphosphate hydrolase domain, at 204,545 to 205,942 GFF2681 GFF2682 - Phage shock protein E precursor, at 206,091 to 206,405 GFF2682
Group Condition GFF2678 GFF2679 GFF2680 GFF2681 GFF2682
phage LB_plus_SM_buffer with EIP16_phage 8.75 MOI -0.3 -2.3 +0.2 -0.1 +0.2
phage LB_plus_SM_buffer with FelixO1_phage 0.05 MOI -0.7 -1.8 +0.2 -0.1 +0.1
phage LB_plus_SM_buffer with FelixO1_phage 0.5 MOI -0.2 -2.5 +0.4 -0.1 +0.6
phage phi19h1_phage 15 MOI -0.5 -1.1 -0.4 +0.2 +0.1
phage LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI -0.2 -1.4 +0.1 +0.0 +0.0
phage LB_plus_SM_buffer with ES18h1_phage 0.75 MOI +0.1 -0.8 +0.4 -0.2 -0.7
phage LB_plus_SM_buffer with FelixO1_phage (wt new) 0.075 MOI -0.1 -1.1 +0.0 +0.0 +0.0
phage phi19h1_phage 15 MOI -0.2 -0.5 -0.3 +0.0 -0.1
phage LB_plus_SM_buffer with FelixO1_phage (wt new) 0.0075 MOI -0.0 -1.0 +0.1 +0.0 -0.1
phage LB_plus_SM_buffer with S16_phage 15 MOI -0.4 -0.3 -0.1 -0.2 +0.2
lb_plus_sm_buffer LB_plus_SM_buffer -0.4 -0.7 +0.2 +0.2 -0.0
phage LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI +0.0 -1.0 +0.3 +0.1 -0.0
phage LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI +0.2 +0.7 -0.6 -0.2 -0.5
nophagecontrol No phage control +0.1 -0.6 -0.4 +0.0 +0.4
phage phi19h1_phage 15 MOI +0.2 -0.8 -0.0 +0.1 +0.4
phage LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI +0.0 -0.6 +0.2 -0.1 +0.4
phage LB_plus_SM_buffer with 6D2_phage 0.75 MOI -0.4 +0.7 -0.2 -0.1 -0.1
phage LB_plus_SM_buffer with 6F2_phage 15 MOI +0.5 -0.2 +0.1 +0.2 -0.5
phage 6F2_phage 15 MOI +0.2 -0.7 +0.3 +0.1 +0.4
phage LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI +0.1 -0.4 +0.5 +0.2 -0.2
phage LB_plus_SM_buffer with P22_phage 15 MOI +0.8 +0.1 -0.2 -0.2 -0.1
phage LB_plus_SM_buffer with 8C2_phage 15 MOI -0.4 +0.5 +0.2 +0.3 -0.2
phage 6H2_phage 10 MOI; agar plate assay +0.0 +0.4 -0.2 +0.2 +0.3
phage LB_plus_SM_buffer with Ffm_phage 18.75 MOI -0.1 +1.2 +0.0 -0.0 -0.2
phage LB_plus_SM_buffer with 6C2_phage 15 MOI +0.4 -0.0 +0.1 +0.2 +0.5
phage LB_plus_SM_buffer with Ffm_phage 1.875 MOI -0.1 +1.1 +0.2 +0.0 +0.1
phage LB_plus_SM_buffer with Ffm_phage 0.001875 MOI +0.1 +1.1 +0.1 +0.0 +0.0
phage LB_plus_SM_buffer with Br60_phage 0.0005 MOI +0.4 +0.5 +0.0 +0.6 +0.2
phage LB_plus_SM_buffer with 6F2_phage 0.1875 MOI +0.2 +0.7 -0.2 +0.4 +1.1
phage LB_plus_SM_buffer with 6F2_phage 1.875 MOI +0.2 +1.5 +0.3 +0.0 +0.1
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