Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF2677 and GFF2678 are separated by 189 nucleotidesGFF2678 and GFF2679 are separated by 24 nucleotidesGFF2679 and GFF2680 are separated by 30 nucleotidesGFF2680 and GFF2681 are separated by 278 nucleotides GFF2677 - Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3), at 98,832 to 100,415 GFF2677 GFF2678 - Glycerol-3-phosphate regulon repressor GlpR, at 100,605 to 101,375 GFF2678 GFF2679 - Glycerol kinase (EC 2.7.1.30), at 101,400 to 102,896 GFF2679 GFF2680 - Protein of unknown function DUF1058, at 102,927 to 103,388 GFF2680 GFF2681 - Phosphoethanolamine transferase EptC [E.coli], specific for LPS heptose I residue, at 103,667 to 105,241 GFF2681
Group Condition GFF2677 GFF2678 GFF2679 GFF2680 GFF2681
complex community Community=arabino-guar; Passage=4 -1.4 +0.6 -0.1 -5.1 -0.5
complex community Community=Locust bean gum; Passage=4 -1.1 +0.3 +0.6 -5.1 -0.1
complex community Community=arabino-guar; Passage=4 -0.8 -0.7 +0.1 -1.4 +0.0
complex community Community=Locust bean gum; Passage=4 -1.4 +0.3 +0.1 -1.4 +0.3
vitamin M9 with Supernatant from Cyptococcus -1.5 +0.2 -0.2 -0.2 +0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -1.0 -0.0 -0.2 -0.4 +0.0
complex community Community=arabino-guar; Passage=4 -1.3 +0.5 +0.3 -1.1 +0.1
complex community Community=Locust bean gum; Passage=4 -1.3 +0.3 +0.2 -0.8 +0.2
complex community Community=arabino-guar; Passage=4 -1.8 -0.6 +0.1 +1.0 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 -0.6 +0.1 -0.8 -0.1
vitamin M9 with Supernatant from Cyptococcus -1.9 +0.2 +0.1 +0.4 +0.1
complex community Community=guar; Passage=4 -1.1 -0.2 +0.4 -0.1 -0.1
complex community Community=Locust bean gum; Passage=1 -0.5 -0.2 +0.2 -0.6 +0.1
vitamin M9 with Supernatant from Cyptococcus -1.2 -0.1 -0.2 +0.4 +0.2
vitamin M9 with Supernatant from Cyptococcus -1.8 +0.3 +0.5 +0.0 +0.2
vitamin M9 with Supernatant from Cyptococcus -1.1 -0.1 -0.1 +0.2 +0.2
phage phage_bap4 -0.3 -0.3 -0.3 +0.4 -0.0
no phage control no phage control -0.5 +0.1 -0.4 +0.3 +0.1
complex community Community=Kojac gum; Passage=4 -0.8 -0.2 +0.5 +0.2 -0.1
complex community Community=guar; Passage=4 -1.0 +0.4 +0.0 +0.4 +0.1
no phage control no phage control -0.5 -0.0 -0.2 +0.8 -0.0
complex community Community=guar; Passage=4 -0.8 +0.1 +0.2 +0.3 +0.2
complex community Community=Locust bean gum; Passage=4 -1.3 +0.5 +0.1 +0.9 -0.2
complex community Community=guar; Passage=4 -0.9 -0.5 +0.4 +1.3 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.5 +0.0 -0.0 +0.6 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.3 -0.1 +0.4 +0.5 +0.1
phage phage_bap4 -0.5 +0.3 +0.0 +0.8 +0.1
phage phage_bap4 -0.2 -0.2 +0.1 +0.8 +0.2
no phage control no phage control -0.3 +0.1 -0.0 +1.1 +0.1
phage phage_bap4 -0.1 +0.3 +0.2 +0.7 +0.0
remove
GFF2677
plot		 remove
GFF2678
plot		 remove
GFF2679		 remove
GFF2680
plot		 remove
GFF2681
plot