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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF2674 and GFF2675 are separated by 2 nucleotides
GFF2675 and GFF2676 overlap by 11 nucleotides
GFF2676 and GFF2677 are separated by 61 nucleotides
GFF2677 and GFF2678 are separated by 189 nucleotides
GFF2674 - FIG00653968: hypothetical protein, at 96,188 to 96,583
GFF2674
GFF2675 - 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.180), at 96,586 to 97,722
GFF2675
GFF2676 - Dialkylrecorsinol condensing enzyme, at 97,712 to 98,770
GFF2676
GFF2677 - Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3), at 98,832 to 100,415
GFF2677
GFF2678 - Glycerol-3-phosphate regulon repressor GlpR, at 100,605 to 101,375
GFF2678
Group
Condition
GFF2674
GFF2675
GFF2676
GFF2677
GFF2678
complex community
Community=guar; Passage=4
-0.5
+0.1
-0.1
-0.9
-0.5
vitamin
M9 with Supernatant from Cyptococcus
-0.1
-0.1
+0.1
-1.9
+0.2
vitamin
M9 with Supernatant from Cyptococcus
+0.0
-0.3
+0.1
-1.2
-0.1
complex community
Community=Locust bean gum; Passage=4
+0.0
-0.5
-0.1
-1.1
+0.3
complex community
Community=arabino-guar; Passage=4
+0.4
-0.4
+0.1
-0.8
-0.7
complex community
Community=guar; Passage=4
+0.2
-0.1
+0.0
-1.1
-0.2
vitamin
M9 with Supernatant from Cyptococcus
+0.3
-0.2
+0.1
-1.5
+0.2
vitamin
M9 with Supernatant from Cyptococcus
-0.1
+0.1
-0.0
-1.1
-0.1
complex community
Community=Kojac gum; Passage=4
+0.2
+0.3
-0.5
-0.8
-0.2
complex community
Community=guar; Passage=4
+0.2
-0.5
-0.0
-1.0
+0.4
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
+0.2
-0.2
+0.0
-1.0
-0.0
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
+0.2
-0.3
+0.1
-0.9
+0.1
vitamin
M9 with Supernatant from Cyptococcus
+0.2
+0.2
+0.3
-1.8
+0.3
complex community
Community=Locust bean gum; Passage=4
+0.1
+0.3
-0.1
-1.3
+0.3
complex community
Community=Locust bean gum; Passage=4
-0.4
+0.6
+0.2
-1.4
+0.3
complex community
Community=arabino-guar; Passage=4
-0.1
-0.1
+0.4
-1.3
+0.5
complex community
Community=arabino-guar; Passage=4
+0.4
+1.1
+0.3
-1.8
-0.6
complex community
Community=Locust bean gum; Passage=4
-0.2
+0.7
-0.3
-1.3
+0.5
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.3
-0.4
+0.2
-0.5
+0.0
phage
phage_bap4
+0.2
-0.1
+0.1
-0.3
-0.3
complex community
Community=guar; Passage=4
-0.1
+0.4
+0.0
-0.8
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.1
+0.3
+0.1
-0.3
-0.5
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.4
+0.1
+0.1
-0.6
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.4
-0.3
+0.0
-0.3
-0.1
phage
phage_bap4
+0.2
+0.2
-0.2
-0.5
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.6
-0.1
+0.2
-0.3
-0.2
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.3
+0.2
+0.3
-0.4
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.3
+0.2
+0.3
-0.3
-0.0
complex community
Community=arabino-guar; Passage=4
+0.2
+0.3
+0.8
-1.4
+0.6
phage
phage_bap4
+0.3
+0.3
+0.1
-0.1
+0.3
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