Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2670 and GFF2671 overlap by 4 nucleotidesGFF2671 and GFF2672 are separated by 11 nucleotidesGFF2672 and GFF2673 overlap by 1 nucleotidesGFF2673 and GFF2674 overlap by 4 nucleotides GFF2670 - Acyl carrier protein, at 92,856 to 93,137 GFF2670 GFF2671 - Domain of unknown function / Efflux ABC transporter, permease protein, at 93,134 to 94,291 GFF2671 GFF2672 - ABC transporter, ATP-binding protein, at 94,303 to 95,211 GFF2672 GFF2673 - FIG00655207: hypothetical protein, at 95,211 to 96,191 GFF2673 GFF2674 - FIG00653968: hypothetical protein, at 96,188 to 96,583 GFF2674
Group Condition GFF2670 GFF2671 GFF2672 GFF2673 GFF2674
complex community Community=Locust bean gum; Passage=4 N.D. -0.4 -0.4 +0.2 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.0 -0.5 +0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. -0.1 -0.6 -0.1 +0.2
complex community Community=guar; Passage=4 N.D. -0.5 +0.5 -0.3 -0.1
vitamin M9 with Supernatant from Cyptococcus N.D. -0.1 +0.2 -0.3 -0.1
vitamin M9 with Supernatant from Cyptococcus N.D. -0.2 -0.5 +0.1 +0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. +0.2 -0.6 -0.0 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. +0.2 -0.3 +0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.2 -0.2 +0.2 -0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. -0.0 -0.3 +0.3 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. +0.0 +0.0 -0.3 +0.4
complex community Community=guar; Passage=4 N.D. -0.3 +0.4 -0.1 +0.2
phage phage_bap4 N.D. +0.3 +0.2 -0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus N.D. +0.2 -0.4 +0.3 +0.2
phage phage_bap4 N.D. +0.1 -0.2 +0.1 +0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. +0.1 -0.3 +0.2 +0.4
complex community Community=guar; Passage=4 N.D. +0.7 -0.0 +0.2 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.1 -0.2 +0.1 +0.6
complex community Community=Locust bean gum; Passage=4 N.D. +0.4 -0.3 +0.6 -0.2
no phage control no phage control N.D. +0.1 -0.1 +0.3 +0.2
phage phage_bap4 N.D. +0.2 -0.1 +0.3 +0.1
complex community Community=arabino-guar; Passage=4 N.D. -0.3 +0.6 +0.4 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.4 +0.1 +0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.3 -0.0 +0.1 +0.3
complex community Community=Kojac gum; Passage=4 N.D. +0.6 +0.1 -0.1 +0.2
complex community Community=arabino-guar; Passage=4 N.D. +0.1 -0.0 +0.3 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. +0.3 +0.1 +0.0 +0.4
phage phage_bap4 N.D. +0.4 +0.2 +0.0 +0.4
complex community Community=arabino-guar; Passage=4 N.D. -0.1 +0.8 +0.0 +0.4
complex community Community=Locust bean gum; Passage=4 N.D. +0.6 +0.8 -0.2 +0.0
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