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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF265 and GFF266 are separated by 10 nucleotides
GFF266 and GFF267 are separated by 71 nucleotides
GFF267 and GFF268 are separated by 63 nucleotides
GFF268 and GFF269 are separated by 39 nucleotides
GFF265 - RND efflux system, membrane fusion protein, at 297,784 to 298,941
GFF265
GFF266 - RND efflux system, inner membrane transporter, at 298,952 to 302,038
GFF266
GFF267 - no description, at 302,110 to 302,352
GFF267
GFF268 - Carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23), at 302,416 to 303,279
GFF268
GFF269 - 2-methylaconitate isomerase, at 303,319 to 304,509
GFF269
Group
Condition
GFF265
GFF266
GFF267
GFF268
GFF269
complex community
Community=Locust bean gum; Passage=4
+0.2
+0.1
-0.8
-3.3
-5.3
complex community
Community=Kojac gum; Passage=4
+0.1
+0.3
+0.1
-4.9
-4.4
complex community
Community=Locust bean gum; Passage=4
-0.3
-0.1
+0.0
-4.1
-4.2
complex community
Community=Locust bean gum; Passage=4
-0.4
+0.1
-0.2
-3.9
-4.2
complex community
Community=guar; Passage=4
-0.0
+0.1
+0.3
-3.5
-5.0
complex community
Community=arabino-guar; Passage=4
-0.2
+0.2
+0.1
-4.6
-3.6
complex community
Community=Locust bean gum; Passage=4
-0.1
-0.1
+0.5
-3.2
-4.5
complex community
Community=arabino-guar; Passage=4
-0.1
+0.2
+0.3
-4.0
-3.7
complex community
Community=arabino-guar; Passage=4
-0.0
+0.2
-0.3
-3.3
-3.3
complex community
Community=guar; Passage=4
-0.1
+0.1
+0.4
-2.6
-4.1
complex community
Community=guar; Passage=4
-0.0
+0.2
+0.0
-2.2
-3.9
complex community
Community=arabino-guar; Passage=4
-0.1
-0.0
+0.4
-3.4
-2.6
complex community
Community=guar; Passage=4
-0.5
+0.1
+0.5
-1.9
-3.6
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.1
+0.0
-0.2
-1.4
-1.5
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.1
-0.0
-0.0
-1.6
-1.5
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.0
+0.1
+0.1
-1.1
-1.7
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.0
-0.0
+0.1
-1.0
-1.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.0
+0.1
-0.1
-1.1
-1.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.0
-0.0
+0.1
-0.9
-1.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.1
-0.0
+0.1
-1.2
-1.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.1
+0.0
+0.2
-0.7
-1.6
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.1
+0.0
+0.0
-0.7
-1.4
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.1
+0.0
+0.2
-1.2
-1.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.1
+0.1
+0.1
-1.0
-1.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.1
+0.1
+0.0
-1.0
-1.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.1
+0.1
+0.1
-0.8
-1.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.2
+0.1
+0.2
-0.7
-1.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.1
+0.1
+0.4
-0.8
-1.1
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.2
+0.1
+0.1
-0.9
-0.9
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.2
+0.0
+0.4
-0.6
-1.2
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