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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF2658 and GFF2659 are separated by 74 nucleotides
GFF2659 and GFF2660 are separated by 2 nucleotides
GFF2660 and GFF2661 are separated by 136 nucleotides
GFF2661 and GFF2662 are separated by 39 nucleotides
GFF2658 - 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC), at 79,547 to 81,337
GFF2658
GFF2659 - Electron transfer flavoprotein, alpha subunit, at 81,412 to 82,344
GFF2659
GFF2660 - Electron transfer flavoprotein, beta subunit, at 82,347 to 83,096
GFF2660
GFF2661 - Potassium efflux system KefA protein / Small-conductance mechanosensitive channel, at 83,233 to 84,513
GFF2661
GFF2662 - Deacetylases, including yeast histone deacetylase and acetoin utilization protein, at 84,553 to 85,506
GFF2662
Group
Condition
GFF2658
GFF2659
GFF2660
GFF2661
GFF2662
complex community
Community=Locust bean gum; Passage=4
-1.3
-3.7
N.D.
-0.4
-0.4
complex community
Community=Locust bean gum; Passage=4
-0.8
-3.6
N.D.
-0.3
-0.6
complex community
Community=guar; Passage=4
-0.5
-3.9
N.D.
-0.7
-0.2
complex community
Community=guar; Passage=4
-0.4
-4.0
N.D.
-0.3
-0.3
complex community
Community=Locust bean gum; Passage=4
-0.6
-3.4
N.D.
-0.6
-0.2
complex community
Community=arabino-guar; Passage=4
-0.1
-3.7
N.D.
-1.1
+0.2
complex community
Community=arabino-guar; Passage=4
-0.4
-4.1
N.D.
+0.3
-0.3
complex community
Community=guar; Passage=4
-0.3
-3.7
N.D.
-0.2
-0.2
complex community
Community=arabino-guar; Passage=4
-0.6
-3.8
N.D.
-0.1
+0.2
complex community
Community=arabino-guar; Passage=4
-0.2
-3.8
N.D.
-0.3
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.1
-3.2
N.D.
-0.2
-0.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.0
-3.4
N.D.
-0.2
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.0
-3.3
N.D.
-0.1
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.0
-3.3
N.D.
+0.0
+0.0
complex community
Community=guar; Passage=4
-0.6
-3.6
N.D.
+1.1
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.0
-2.5
N.D.
-0.3
-0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.0
-3.2
N.D.
+0.1
+0.0
complex community
Community=Locust bean gum; Passage=4
-0.4
-3.0
N.D.
+0.8
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.1
-2.4
N.D.
-0.1
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.2
-2.5
N.D.
-0.1
+0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.0
-1.8
N.D.
-0.6
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.1
-2.9
N.D.
+0.6
-0.1
complex community
Community=Kojac gum; Passage=4
-0.5
-1.6
N.D.
-0.0
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.1
-2.2
N.D.
+0.0
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.0
-2.1
N.D.
+0.2
-0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.0
-2.2
N.D.
+0.1
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.1
-2.1
N.D.
+0.1
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.1
-2.0
N.D.
+0.3
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.0
-1.7
N.D.
+0.4
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.1
-1.6
N.D.
+0.6
-0.1
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