Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_13510	PS417_13515	PS417_13520	PS417_13525	PS417_13540
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-5.5	-0.0	+0.0	+0.1	-0.0
soil	soil sample 5; outgrowth in LB	-4.9	-0.7	-0.1	+0.2	+0.0
soil	soil sample 7; outgrowth in LB	-5.1	-0.3	-0.2	+0.6	-0.1
soil	soil sample 4; outgrowth in LB	-4.9	+0.1	+0.1	-0.1	-0.2
rhizosphere	rhizosphere sample 1; outgrowth in LB	-4.1	-0.6	-0.0	-0.3	+0.2
soil	soil sample 8; outgrowth in LB	-5.0	-0.2	+0.2	-0.1	+0.3
phage	P. simiae OR Antrim MOI 1	-4.4	-0.1	+0.2	-0.8	+0.3
soil	soil sample 3; outgrowth in LB	-4.8	+0.1	-0.1	+0.2	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-3.2	-0.1	-0.0	-0.5	-0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	-2.3	-0.3	-0.3	-0.2	-0.8
rhizosphere	rhizosphere sample 2; outgrowth in LB	-4.1	-0.4	-0.0	+0.6	-0.1
solid stress	80% Methanol 3 mM; solid stress	-3.5	-0.1	+0.2	-0.6	+0.2
solid stress	Fraxetin 0.5 mM; solid stress	-3.5	-0.1	+0.0	-0.3	+0.1
solid stress	Scopoletin 1 mM; solid stress	-3.5	-0.1	+0.0	-0.1	+0.1
phage	P. simiae OR Antrim MOI 10	-2.1	-0.1	-0.2	-0.6	-0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	-3.1	-0.2	-0.0	+0.0	-0.2
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-3.1	+0.0	+0.0	-0.3	-0.2
solid stress	Fraxetin 2 mM; solid stress	-2.8	-0.1	+0.0	-0.6	-0.0
liquid stress	Fraxetin 3 mM; liquid stress	-3.2	+0.0	+0.1	-0.5	+0.2
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-2.6	-0.3	+0.2	-0.5	+0.0
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-3.3	+0.2	-0.2	+0.3	-0.2
carbon source	2'-Deoxyinosine 5 mM (C)	-3.5	+0.3	+0.1	-0.1	+0.2
seeds	Growth on radish seeds for 72 hours	-3.3	+0.1	+0.1	+0.1	+0.0
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-2.9	-0.3	+0.1	+0.4	-0.2
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-3.0	+0.2	+0.3	+0.1	-0.3
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-3.3	+0.2	+0.2	+0.4	-0.0
soil	soil sample 6; outgrowth in LB	-2.4	+0.0	+0.1	+0.6	-0.4
carbon source	L-Valine (C)	-3.0	+0.3	-0.2	+0.9	+0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.3	-0.7	-0.1	-0.7	-0.8
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+1.0	+0.7	+0.4	+1.6	-0.0