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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF2646 and GFF2647 are separated by 47 nucleotides
GFF2647 and GFF2648 are separated by 140 nucleotides
GFF2648 and GFF2649 are separated by 27 nucleotides
GFF2649 and GFF2650 are separated by 187 nucleotides
GFF2646 - Acetyl-CoA acetyltransferase, at 59,129 to 60,313
GFF2646
GFF2647 - Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3), at 60,361 to 61,920
GFF2647
GFF2648 - Transcriptional regulator, AraC family, at 62,061 to 63,095
GFF2648
GFF2649 - putative autotransporter protein, at 63,123 to 69,965
GFF2649
GFF2650 - hypothetical protein, at 70,153 to 70,740
GFF2650
Group
Condition
GFF2646
GFF2647
GFF2648
GFF2649
GFF2650
complex community
Community=guar; Passage=4
+0.1
-0.4
+0.2
+0.2
-2.5
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.3
-0.0
-0.7
-0.0
-0.7
complex community
Community=guar; Passage=4
+0.0
+0.1
-0.0
+0.2
-2.0
complex community
Community=guar; Passage=4
+0.3
-0.3
-1.0
+0.3
-0.9
vitamin
M9 with Supernatant from Cyptococcus
-0.1
-0.1
-0.6
+0.1
-0.8
complex community
Community=Kojac gum; Passage=4
-0.2
+0.1
-0.3
+0.5
-1.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.1
-0.1
-0.4
+0.2
-0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.0
-0.1
-0.5
+0.3
-0.4
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.0
-0.2
-0.4
+0.2
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.4
-0.0
-0.1
+0.3
-0.2
complex community
Community=arabino-guar; Passage=4
-1.2
-0.0
-0.1
+1.6
-0.6
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.1
-0.1
-0.4
+0.4
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.0
-0.1
-0.3
+0.3
-0.2
complex community
Community=arabino-guar; Passage=4
-0.0
+0.4
-0.4
+1.0
-1.1
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.2
+0.1
+0.2
+0.1
-0.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.2
+0.1
-0.1
+0.4
-0.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.3
-0.2
+0.1
+0.4
-0.1
phage
phage_bap4
+0.1
-0.1
-0.3
+0.0
+0.2
complex community
Community=guar; Passage=4
+0.0
+0.3
-0.0
+0.2
-0.5
complex community
Community=Locust bean gum; Passage=4
-0.1
+0.0
-1.1
+1.3
-0.0
phage
phage_bap4
-0.3
-0.1
+0.3
+0.1
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.0
+0.0
-0.3
+0.3
+0.1
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.1
-0.0
+0.5
+0.1
-0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.1
-0.2
+0.1
+0.5
-0.1
complex community
Community=Locust bean gum; Passage=1
+0.1
+0.2
-0.3
+0.3
+0.0
complex community
Community=Locust bean gum; Passage=4
+0.1
+0.3
-0.5
+1.2
-0.4
complex community
Community=arabino-guar; Passage=4
-0.5
+0.1
+0.6
+1.9
-0.8
complex community
Community=Locust bean gum; Passage=4
+0.0
+0.2
-0.3
+1.4
-0.1
complex community
Community=Locust bean gum; Passage=4
+0.0
+0.1
-0.0
+1.1
+0.2
complex community
Community=arabino-guar; Passage=4
+0.1
+0.3
-0.3
+2.0
-0.3
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