Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 552 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PS417_13420	PS417_13425	PS417_13430	PS417_13435	PS417_13440
phage	JP1 MOI 1	-0.2	-1.8	-0.3	+0.2	-0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.9	-0.8	+0.3	-0.4	-0.1
stress	Gentamicin 0.008 mg/ml	-0.3	-1.6	+0.1	+0.5	-0.5
agar plate interaction control	Taped volatile agar plate with no fungus	-0.7	+0.4	-0.2	-0.8	-0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.3	-1.8	-0.2	+0.5	+0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.7	-1.4	-0.0	+0.5	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.4	-0.7	+0.4	+0.5	-0.2
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.3	+1.1	-0.1	+0.4	-0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	-0.2	+1.8	+0.4	-0.4	+0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.4	+1.8	+0.1	+0.0	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.1	+1.9	+0.0	-0.2	+0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.2	+1.6	+0.3	+0.2	-0.1
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.4	+2.2	-0.3	+0.1	+0.2
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.5	+1.1	-0.1	+0.3	+0.3
carbon source	Trisodium citrate (C)	+0.2	+1.7	-0.1	+0.5	+0.1
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.2	+2.2	+0.0	+0.1	+0.3
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.1	+3.3	-0.3	-0.2	-0.1
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.4	+1.6	+0.1	+0.5	+0.1
soil	soil sample 4; outgrowth in LB	-0.4	+3.8	+0.0	-0.6	+0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.2	+2.9	+0.1	+0.1	-0.2
soil	soil sample 7; outgrowth in LB	+0.1	+3.4	+0.0	-0.1	-0.0
soil	soil sample 6; outgrowth in LB	+0.0	+4.2	-0.0	-0.3	-0.3
soil	soil sample 3; outgrowth in LB	+0.3	+2.7	+0.3	+0.2	+0.1
soil	soil sample 5; outgrowth in LB	+0.1	+4.0	+0.3	-0.2	-0.1
soil	soil sample 8; outgrowth in LB	+0.1	+4.4	+0.0	+0.2	+0.0
soil	soil sample 2; outgrowth in LB	+0.0	+4.8	+0.3	-0.3	+0.0
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.2	+5.3	+0.0	-0.1	-0.1
rhizosphere	rhizosphere sample 8; outgrowth in LB	+0.3	+4.7	-0.0	+0.0	+0.4
root	root sample 6; outgrowth in LB	+0.3	+5.3	-0.2	+0.2	+0.2
rhizosphere	rhizosphere sample 2; outgrowth in LB	+0.1	+7.9	+0.2	+0.1	-0.2