Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF261 and GFF262 are separated by 71 nucleotidesGFF262 and GFF263 are separated by 196 nucleotidesGFF263 and GFF264 are separated by 257 nucleotidesGFF264 and GFF265 are separated by 103 nucleotides GFF261 - no description, at 294,034 to 294,267 GFF261 GFF262 - Phage repressor protein cI, at 294,339 to 295,055 GFF262 GFF263 - Secreted and surface protein containing fasciclin-like repeats, at 295,252 to 295,812 GFF263 GFF264 - Efflux transport system, outer membrane factor (OMF) lipoprotein, at 296,070 to 297,680 GFF264 GFF265 - RND efflux system, membrane fusion protein, at 297,784 to 298,941 GFF265
Group Condition GFF261 GFF262 GFF263 GFF264 GFF265
complex community Community=guar; Passage=4 -0.4 +0.0 -0.4 -0.0 -0.0
complex community Community=Locust bean gum; Passage=4 +0.2 -0.1 -0.5 -0.0 -0.3
complex community Community=Locust bean gum; Passage=4 -0.0 +0.1 -0.3 +0.1 -0.4
phage phage_bap4 -0.1 -0.2 -0.3 +0.0 +0.1
complex community Community=Locust bean gum; Passage=4 -0.4 -0.0 +0.0 +0.1 -0.1
phage phage_bap4 +0.0 -0.1 -0.1 +0.1 -0.2
phage phage_bap4 -0.1 -0.3 +0.0 +0.1 -0.0
complex community Community=arabino-guar; Passage=4 -0.0 -0.2 +0.0 +0.1 -0.1
phage phage_bap4 +0.1 +0.0 -0.3 -0.0 +0.0
complex community Community=arabino-guar; Passage=4 -0.5 +0.2 +0.1 +0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 -0.0 -0.1 +0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.1 -0.2 -0.0 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 -0.0 -0.3 +0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 +0.0 -0.2 +0.1 +0.1
complex community Community=Kojac gum; Passage=4 +0.3 +0.1 -0.3 -0.3 +0.1
complex community Community=Locust bean gum; Passage=4 -0.3 -0.2 +0.2 +0.2 +0.2
complex community Community=guar; Passage=4 +0.3 -0.1 +0.3 +0.1 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 +0.0 +0.0 -0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 +0.2 +0.1 -0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.0 +0.2 +0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 +0.1 +0.1 +0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 -0.0 +0.2 +0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 -0.0 +0.2 +0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.0 +0.2 -0.0 +0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 +0.2 +0.1 +0.1 +0.1
complex community Community=arabino-guar; Passage=4 +0.5 +0.1 +0.0 +0.2 -0.2
no phage control no phage control +0.1 +0.1 +0.1 +0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus +0.3 +0.2 +0.0 +0.2 +0.1
complex community Community=arabino-guar; Passage=4 -0.2 +0.3 +0.4 +0.6 -0.0
complex community Community=guar; Passage=4 +0.7 -0.0 +0.4 +0.3 -0.0
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