Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 554 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PS417_13335	PS417_13340	PS417_13345	PS417_13350	PS417_13355
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	-0.6	-0.3	-0.7	-0.4	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.2	-0.3	-0.2	-0.5	-1.0
carbon source	2'-Deoxyinosine 5 mM (C)	+0.4	-0.3	-0.8	-0.8	-0.3
phage	JP1 MOI 0.1	-0.6	-0.3	+0.3	-0.7	-0.2
seeds	Growth on radish seeds for 72 hours	-1.0	-0.4	-0.0	+0.3	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.3	+0.2	-0.8	-0.0	-0.6
soil	soil sample 7; outgrowth in LB	-0.2	+0.5	-0.2	+0.2	-0.9
phage	P. simiae Grant Run MOI 10	+0.5	-0.0	-0.4	-0.7	+0.0
carbon source	Carbon source L-Citrulline 5 mM	-0.4	+0.3	-0.4	+0.3	-0.3
rhizosphere	rhizosphere sample 2; outgrowth in LB	-0.7	+0.6	+0.2	-0.6	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.3	+0.7	-0.3	-0.4	-0.0
root	root sample 6; outgrowth in LB	-1.1	-0.1	+0.4	+0.4	+0.0
seeds	Growth on radish seeds for 72 hours	-0.1	-0.6	+0.5	+0.5	-0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.5	+0.2	+0.4	-0.6	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.7	-0.4	-0.7	-0.2	+0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.5	+0.4	-0.3	-0.5	-0.1
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6	+0.2	-0.3	-0.4	+0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.7	+0.1	-0.4	-0.4	+0.3
phage	P. simiae OR Antrim MOI 1	+0.8	+0.1	-0.6	-0.2	+0.2
phage	FRSphage	-0.6	-0.1	+0.3	+0.5	+0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.5	-0.2	+1.1	+0.1	-0.0
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB	+1.1	-0.1	-0.3	-0.2	+0.0
soil	soil sample 6; outgrowth in LB	+0.6	-0.5	-0.1	+0.4	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.4	-0.0	+0.4	+0.7	+0.2
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.1	-0.0	-0.6	+0.1	+0.3
carbon source	L-Valine (C)	+0.8	+0.1	-0.3	+0.1	+0.4
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB	+0.9	-0.2	+0.4	-0.2	+0.1
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.9	+0.3	+0.2	-0.2	+0.1
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+1.4	+0.1	+0.3	-0.1	-0.2
agar plate interaction control	Taped volatile agar plate with no fungus	+0.9	+0.2	+0.5	-0.1	+0.1