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Cofit
Protein
Homologs
Fitness for 5 genes in
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF2613 and GFF2614 are separated by 48 nucleotides
GFF2614 and GFF2615 are separated by 292 nucleotides
GFF2615 and GFF2616 are separated by 60 nucleotides
GFF2616 and GFF2617 are separated by 186 nucleotides
GFF2613 - Putative esterase, at 137,320 to 138,828
GFF2613
GFF2614 - FIG074102: hypothetical protein, at 138,877 to 140,220
GFF2614
GFF2615 - LysR family transcriptional regulator YdcI, at 140,513 to 141,436
GFF2615
GFF2616 - Methyl-accepting chemotaxis protein III (ribose and galactose chemoreceptor protein), at 141,497 to 143,104
GFF2616
GFF2617 - S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284), at 143,291 to 144,409
GFF2617
Group
Condition
GFF2613
GFF2614
GFF2615
GFF2616
GFF2617
phage
Br60_phage 15 MOI
-0.3
-0.3
-0.2
-0.0
-0.3
phage
6F2_phage 15 MOI
-0.2
-0.2
-0.3
+0.1
-0.4
phage
6H2_phage 10 MOI; agar plate assay
-0.4
-0.1
-0.0
+0.2
-0.4
phage
LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI
+0.1
-0.3
-0.7
+0.2
-0.0
phage
phi19h1_phage 15 MOI
+0.1
-0.1
-0.8
+0.1
+0.1
phage
LB_plus_SM_buffer with 6F2_phage 15 MOI
-0.0
+0.2
-0.2
-0.5
-0.1
phage
6F2_phage 15 MOI
+0.1
-0.5
-0.0
+0.1
-0.2
nophagecontrol
No phage control
+0.1
-0.3
-0.2
+0.2
-0.2
phage
LB_plus_SM_buffer with EIP16_phage 0.875 MOI
+0.2
-0.2
+0.2
-0.0
-0.6
phage
LB_plus_SM_buffer with 6F2_phage 0.1875 MOI
-0.0
+0.4
-0.1
-0.0
-0.7
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
-0.5
+0.3
-0.1
-0.1
+0.0
phage
LB_plus_SM_buffer with 6C2_phage 15 MOI
+0.2
+0.2
-0.3
-0.3
-0.2
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
+0.2
+0.4
-0.5
-0.2
-0.1
phage
LB_plus_SM_buffer with FelixO1_phage 0.5 MOI
-0.1
-0.4
+0.5
-0.3
+0.0
phage
LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI
+0.1
+0.4
-0.5
-0.2
+0.1
phage
LB_plus_SM_buffer with S16_phage 15 MOI
+0.0
+0.3
+0.3
-0.4
-0.4
phage
LB_plus_SM_buffer with 6D2_phage 0.75 MOI
+0.1
+0.3
-0.4
-0.2
+0.2
phage
LB_plus_SM_buffer with ES18h1_phage 0.75 MOI
+0.7
+0.8
-1.1
+0.1
-0.4
phage
LB_plus_SM_buffer with phi19h1_phage 0.001875 MOI
+0.2
+0.1
-0.4
+0.2
-0.1
phage
Ffm_phage 10 MOI; agar plate assay
+0.2
+0.4
+0.0
-0.2
-0.2
phage
LB_plus_SM_buffer with phi19h1_phage 15 MOI
+0.2
+0.0
-0.2
+0.1
+0.3
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
+0.3
+0.3
+0.3
-0.4
-0.0
phage
LB_plus_SM_buffer with EIP16_phage 8.75 MOI
+0.2
-0.2
+0.8
+0.1
-0.4
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
+0.3
+0.2
+0.2
-0.2
+0.2
phage
phi19h1_phage 15 MOI
+0.2
+0.3
-0.3
+0.1
+0.3
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
+0.1
+0.4
+0.1
-0.2
+0.2
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
+0.3
+0.5
+0.2
-0.2
+0.0
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
+0.2
+0.3
+0.1
+0.1
+0.3
phage
LB_plus_SM_buffer with 6F2_phage 1.875 MOI
+0.4
+0.5
+0.3
+0.2
-0.1
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
+0.5
+0.2
+0.6
+0.0
+0.1
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