Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2606 and GFF2607 are separated by 19 nucleotidesGFF2607 and GFF2608 overlap by 4 nucleotidesGFF2608 and GFF2609 overlap by 8 nucleotidesGFF2609 and GFF2610 overlap by 1 nucleotides GFF2606 - Tripartite tricarboxylate transporter TctC family, at 11,467 to 12,483 GFF2606 GFF2607 - hypothetical protein, at 12,503 to 12,904 GFF2607 GFF2608 - Transcriptional regulator FrcR for fructose utilization, ROK family, at 12,901 to 14,124 GFF2608 GFF2609 - Fructose ABC transporter, ATP-binding component FrcA, at 14,117 to 14,914 GFF2609 GFF2610 - Fructose ABC transporter, permease component FrcC, at 14,914 to 15,873 GFF2610
Group Condition GFF2606 GFF2607 GFF2608 GFF2609 GFF2610
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.3 -0.1 +0.3 -1.0 -0.8
complex community Community=Locust bean gum; Passage=4 -0.6 -0.7 +0.1 -0.8 +0.2
vitamin M9 with Supernatant from Cyptococcus +0.0 +0.0 +0.0 -1.0 -0.5
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.3 +0.4 +0.4 -1.6 -0.8
complex community Community=guar; Passage=4 +0.2 -0.7 +0.2 -0.6 -0.3
complex community Community=Locust bean gum; Passage=4 -0.1 -1.0 +0.0 +0.4 -0.5
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.3 +0.0 -0.9 -0.4
complex community Community=guar; Passage=4 +0.4 -0.5 -0.8 -0.2 +0.2
vitamin M9 with Supernatant from Cyptococcus +0.0 +0.2 +0.0 -0.8 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 -0.4 +0.3 -0.7 -0.3
complex community Community=guar; Passage=4 -0.1 -0.6 -0.7 +0.7 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.3 -0.1 +0.5 -0.4 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 +0.1 +0.3 -0.6 -0.2
complex community Community=arabino-guar; Passage=4 +0.3 -0.4 -0.2 -0.5 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 -0.0 +0.5 -0.7 -0.0
complex community Community=Kojac gum; Passage=4 +0.4 +0.6 -1.4 +0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 +0.0 +0.6 -0.6 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 +0.2 +0.5 -0.5 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 -0.5 +0.6 -0.2 -0.1
complex community Community=arabino-guar; Passage=4 +0.5 +0.3 -0.1 -0.6 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.1 +0.7 -0.6 +0.1
complex community Community=Locust bean gum; Passage=4 +0.6 -0.2 +0.4 -0.4 +0.1
complex community Community=guar; Passage=4 +0.8 -0.5 -0.1 +0.6 -0.3
complex community Community=Locust bean gum; Passage=4 +0.2 +0.4 -0.0 -0.4 +0.3
phage phage_bap4 +0.4 +0.1 +0.3 -0.4 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 +0.2 +0.6 +0.0 -0.3
no phage control no phage control +0.2 +0.5 +0.3 -0.1 +0.3
phage phage_bap4 +0.3 +0.3 +0.5 -0.1 +0.6
phage phage_bap4 +0.3 +0.4 +0.4 -0.0 +0.6
phage phage_bap4 +0.3 +0.3 +0.3 +0.5 +0.4
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