Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2598 and GFF2599 are separated by 16 nucleotidesGFF2599 and GFF2600 are separated by 28 nucleotidesGFF2600 and GFF2601 are separated by 199 nucleotidesGFF2601 and GFF2602 are separated by 8 nucleotides GFF2598 - 3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2), at 3,579 to 4,793 GFF2598 GFF2599 - Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25), at 4,810 to 5,643 GFF2599 GFF2600 - Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25), at 5,672 to 6,595 GFF2600 GFF2601 - Transcriptional regulator, IclR family, at 6,795 to 7,580 GFF2601 GFF2602 - no description, at 7,589 to 8,254 GFF2602
Group Condition GFF2598 GFF2599 GFF2600 GFF2601 GFF2602
complex community Community=arabino-guar; Passage=4 -0.8 +0.3 +0.3 -0.4 -0.8
complex community Community=guar; Passage=4 -1.7 +1.0 -0.3 +0.2 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 -0.8 +0.0 +0.2 -0.2
complex community Community=arabino-guar; Passage=4 -0.1 -0.4 +0.1 +0.4 -0.8
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 -0.6 -0.1 +0.3 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.4 -0.7 +0.2 +0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.3 -0.3 -0.2 +0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus -0.3 -0.3 -0.1 -0.0 +0.2
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.3 +0.1 +0.2 -0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.4 -0.1 -0.1 +0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 -0.3 -0.1 +0.1 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.4 -0.5 -0.1 -0.2 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 -0.6 -0.0 +0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.5 -0.3 +0.1 +0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 -0.5 +0.0 +0.1 -0.1
complex community Community=guar; Passage=4 +0.1 +0.3 +0.0 -0.5 -0.0
complex community Community=guar; Passage=4 -0.6 +0.4 -0.0 +0.3 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 -0.5 +0.0 +0.3 +0.1
complex community Community=Locust bean gum; Passage=4 -0.7 +0.5 +0.0 -0.0 +0.1
complex community Community=Locust bean gum; Passage=4 -0.7 +0.0 +0.4 -0.0 +0.4
complex community Community=arabino-guar; Passage=4 -0.3 +1.0 -0.2 +0.4 -0.8
complex community Community=Kojac gum; Passage=4 +0.1 +0.2 -0.3 +0.2 +0.3
phage phage_bap4 +0.1 -0.2 +0.1 +0.2 +0.4
complex community Community=Kojac gum; Passage=1 +0.1 +0.4 +0.3 -0.2 +0.1
complex community Community=Locust bean gum; Passage=1 +0.1 +0.6 -0.0 -0.1 +0.1
phage phage_bap4 +0.2 +0.1 +0.2 +0.1 +0.3
complex community Community=Locust bean gum; Passage=4 -0.0 +0.6 +0.1 +0.2 +0.0
phage phage_bap4 +0.2 +0.1 +0.3 +0.1 +0.2
phage phage_bap4 +0.1 +0.3 +0.3 +0.1 +0.2
complex community Community=Locust bean gum; Passage=4 -0.2 +1.1 +0.2 +0.5 +0.3
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