Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF24 and GFF25 are separated by 140 nucleotidesGFF25 and GFF26 are separated by 134 nucleotidesGFF26 and GFF27 overlap by 4 nucleotidesGFF27 and GFF28 are separated by 14 nucleotides GFF24 - VgrG protein, at 26,729 to 29,071 GFF24 GFF25 - Alcohol dehydrogenase (EC 1.1.1.1), at 29,212 to 30,348 GFF25 GFF26 - Esterase/lipase, at 30,483 to 31,463 GFF26 GFF27 - 4-hydroxybenzoyl-CoA thioesterase family active site, at 31,460 to 32,335 GFF27 GFF28 - hypothetical protein, at 32,350 to 33,246 GFF28
Group Condition GFF24 GFF25 GFF26 GFF27 GFF28
complex community Community=Locust bean gum; Passage=4 -0.4 -0.6 -0.0 +0.0 -0.6
complex community Community=arabino-guar; Passage=4 -0.3 -0.1 +0.0 -0.5 -0.4
complex community Community=guar; Passage=4 -0.0 -0.4 +0.1 -0.1 -0.3
complex community Community=Kojac gum; Passage=1 -0.0 +0.1 -0.3 -0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 -0.1 +0.1 -0.0 -0.3
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.1 -0.0 -0.3 -0.1
vitamin M9 with Supernatant from Cyptococcus -0.2 +0.2 -0.2 +0.0 -0.2
vitamin M9 with Supernatant from Cyptococcus -0.2 +0.1 -0.1 -0.2 +0.1
complex community Community=Locust bean gum; Passage=4 -0.2 -0.7 +0.7 +0.2 -0.2
complex community Community=Locust bean gum; Passage=1 -0.0 +0.3 -0.2 -0.2 -0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.0 +0.2 -0.0 -0.3 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 +0.1 +0.1 -0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 +0.3 -0.2 -0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.4 -0.4 +0.0 +0.0
complex community Community=Locust bean gum; Passage=4 +0.2 +0.5 -0.5 -0.1 -0.0
complex community Community=arabino-guar; Passage=4 -0.1 +0.1 -0.1 -0.2 +0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 -0.1 -0.2 +0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 +0.1 +0.3 +0.0 -0.2
complex community Community=guar; Passage=4 -0.1 +0.5 -0.3 +0.0 +0.0
phage phage_bap4 -0.1 +0.3 -0.1 +0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 +0.2 +0.2 +0.0 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.0 +0.1 -0.2 +0.2 +0.2
complex community Community=Kojac gum; Passage=4 +0.2 +0.4 +0.1 -0.1 -0.1
complex community Community=guar; Passage=4 -0.1 +0.3 -0.1 +0.5 +0.1
complex community Community=arabino-guar; Passage=4 -0.1 +0.2 +0.3 +0.2 +0.2
phage phage_bap4 +0.3 +0.2 +0.0 +0.2 +0.2
complex community Community=arabino-guar; Passage=4 +0.1 +0.3 -0.1 +0.6 -0.0
phage phage_bap4 +0.3 +0.3 +0.1 +0.1 +0.3
complex community Community=Locust bean gum; Passage=4 -0.2 +0.4 +0.4 +0.3 +0.1
complex community Community=guar; Passage=4 +0.2 +0.8 +0.0 +0.2 -0.1
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