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Cofit
Protein
Homologs
Fitness for 5 genes in
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF24 and GFF25 overlap by 37 nucleotides
GFF25 and GFF26 are separated by 110 nucleotides
GFF26 and GFF27 are separated by 73 nucleotides
GFF27 and GFF28 are separated by 52 nucleotides
GFF24 - Protein RcsF, at 3,958 to 4,089
GFF24
GFF25 - COG1720: Uncharacterized conserved protein, at 4,053 to 4,793
GFF25
GFF26 - Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type, at 4,904 to 6,622
GFF26
GFF27 - Copper homeostasis protein CutF precursor / Lipoprotein NlpE involeved in surface adhesion, at 6,696 to 6,818
GFF27
GFF28 - Copper homeostasis protein CutF precursor / Lipoprotein NlpE involeved in surface adhesion, at 6,871 to 7,401
GFF28
Group
Condition
GFF24
GFF25
GFF26
GFF27
GFF28
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI
N.D.
-0.2
N.D.
-1.3
+0.1
phage
phi19h1_phage 15 MOI
N.D.
-0.2
N.D.
-0.9
-0.0
phage
phi19h1_phage 15 MOI
N.D.
+0.3
N.D.
-1.4
+0.1
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.075 MOI
N.D.
-0.3
N.D.
-0.6
+0.0
nophagecontrol
No phage control
N.D.
-0.0
N.D.
-0.8
+0.0
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
N.D.
-0.3
N.D.
-0.6
+0.1
phage
LB_plus_SM_buffer with FelixO1_phage 0.5 MOI
N.D.
-0.1
N.D.
-0.8
+0.2
phage
6F2_phage 15 MOI
N.D.
-0.3
N.D.
-0.5
+0.1
phage
LB_plus_SM_buffer with 6D2_phage 0.75 MOI
N.D.
+0.3
N.D.
-0.9
-0.0
phage
LB_plus_SM_buffer with Br60_phage 0.00005 MOI
N.D.
+0.1
N.D.
-0.7
-0.0
phage
Br60_phage 15 MOI
N.D.
+0.2
N.D.
-0.5
-0.2
phage
LB_plus_SM_buffer with 6C2_phage 0.25 MOI
N.D.
+0.4
N.D.
-0.9
+0.1
phage
LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI
N.D.
-0.2
N.D.
-0.5
+0.3
phage
LB_plus_SM_buffer with phi19h1_phage 0.001875 MOI
N.D.
+0.0
N.D.
-0.5
+0.2
phage
LB_plus_SM_buffer with 6H2_phage 0.5 MOI
N.D.
+0.3
N.D.
-0.4
+0.1
phage
6F2_phage 15 MOI
N.D.
-0.3
N.D.
+0.7
-0.1
phage
LB_plus_SM_buffer with FelixO1_phage 0.05 MOI
N.D.
-0.3
N.D.
+0.5
+0.1
phage
LB_plus_SM_buffer with EIP30_phage 0.0000875 MOI
N.D.
-0.2
N.D.
+0.5
+0.1
phage
LB_plus_SM_buffer with S16_phage 15 MOI
N.D.
+0.5
N.D.
-0.3
+0.3
phage
LB_plus_SM_buffer with Ffm_phage 15 MOI
N.D.
-0.1
N.D.
+0.5
+0.2
phage
LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI
N.D.
+0.4
N.D.
-0.1
+0.4
phage
LB_plus_SM_buffer with 6F2_phage 15 MOI
N.D.
-0.1
N.D.
+0.8
+0.0
lb_plus_sm_buffer
LB_plus_SM_buffer
N.D.
+0.0
N.D.
+0.6
+0.2
phage
LB_plus_SM_buffer with EIP16_phage 0.875 MOI
N.D.
+0.2
N.D.
+0.2
+0.4
phage
LB_plus_SM_buffer with EIP16_phage 8.75 MOI
N.D.
+0.2
N.D.
+0.1
+0.5
phage
LB_plus_SM_buffer with ES18h1_phage 0.75 MOI
N.D.
-0.1
N.D.
+1.0
-0.0
phage
LB_plus_SM_buffer with 6F2_phage 0.1875 MOI
N.D.
+0.7
N.D.
+0.4
+0.1
phage
LB_plus_SM_buffer with phi19h1_phage 15 MOI
N.D.
+0.2
N.D.
+0.8
+0.2
phage
LB_plus_SM_buffer with S16_phage 15 MOI
N.D.
+0.7
N.D.
+0.2
+0.5
phage
LB_plus_SM_buffer with P22_phage 15 MOI
N.D.
+0.4
N.D.
+1.2
+0.7
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