Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2594 and GFF2595 are separated by 133 nucleotidesGFF2595 and GFF2596 overlap by 4 nucleotidesGFF2596 and GFF2597 overlap by 4 nucleotidesGFF2597 and GFF2598 overlap by 4 nucleotides GFF2594 - 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27), at 8 to 1,036 GFF2594 GFF2595 - Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24), at 1,170 to 1,934 GFF2595 GFF2596 - Multidrug resistance transporter, Bcr/CflA family, at 1,931 to 3,151 GFF2596 GFF2597 - 4-carboxymuconolactone decarboxylase (EC 4.1.1.44), at 3,148 to 3,582 GFF2597 GFF2598 - 3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2), at 3,579 to 4,793 GFF2598
Group Condition GFF2594 GFF2595 GFF2596 GFF2597 GFF2598
complex community Community=guar; Passage=4 -1.0 -0.3 +0.2 -0.2 -1.7
complex community Community=Locust bean gum; Passage=4 -0.8 +0.1 -0.2 -1.7 -0.2
complex community Community=Locust bean gum; Passage=4 -0.0 -0.1 +0.2 -1.6 -0.7
complex community Community=Locust bean gum; Passage=4 +0.1 -0.3 +0.3 -0.4 -0.7
complex community Community=arabino-guar; Passage=4 -0.2 -0.4 +0.0 -0.2 -0.3
complex community Community=arabino-guar; Passage=4 +0.2 -0.2 +0.1 -0.7 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.5 +0.0 +0.0 -0.2
complex community Community=guar; Passage=4 -0.2 +0.4 +0.2 -0.5 -0.6
complex community Community=arabino-guar; Passage=4 -0.2 +0.6 +0.3 -0.2 -0.8
complex community Community=Locust bean gum; Passage=4 -0.3 +0.8 +0.3 -1.3 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 -0.4 +0.2 -0.0 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.2 +0.1 +0.4 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 +0.2 +0.1 -0.3 -0.2
complex community Community=Kojac gum; Passage=4 -0.0 -0.4 +0.1 +0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 -0.0 +0.0 +0.2 -0.5
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.0 +0.1 +0.2 +0.1 -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 +0.2 +0.0 +0.1 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 +0.2 +0.1 -0.3 +0.1
complex community Community=guar; Passage=4 +0.4 +0.0 +0.4 -0.7 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.2 +0.1 +0.2 +0.3
complex community Community=Kojac gum; Passage=1 +0.2 -0.1 +0.2 -0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus +0.1 +0.2 +0.0 +0.2 -0.2
phage phage_bap4 +0.0 -0.0 +0.1 +0.5 -0.1
vitamin M9 with Supernatant from Cyptococcus +0.1 +0.4 +0.1 +0.3 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 +0.2 +0.3 +0.3 +0.1
phage phage_bap4 +0.2 +0.1 +0.0 +0.3 +0.2
phage phage_bap4 +0.1 +0.1 +0.3 +0.3 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.3 +0.4 +0.2 -0.2 +0.3
phage phage_bap4 +0.2 +0.5 +0.2 +0.1 +0.1
complex community Community=arabino-guar; Passage=4 +0.6 +0.3 +0.3 +0.1 -0.1
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