Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2578 and GFF2579 are separated by 19 nucleotidesGFF2579 and GFF2580 are separated by 69 nucleotidesGFF2580 and GFF2581 are separated by 21 nucleotidesGFF2581 and GFF2582 are separated by 78 nucleotides GFF2578 - Pantoate--beta-alanine ligase (EC 6.3.2.1), at 634,690 to 635,532 GFF2578 GFF2579 - 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11), at 635,552 to 636,445 GFF2579 GFF2580 - L-aspartate oxidase (EC 1.4.3.16), at 636,515 to 638,101 GFF2580 GFF2581 - Segregation and condensation protein A, at 638,123 to 638,959 GFF2581 GFF2582 - Uncharacterized DUF3460-containg protein Bmul_0854, at 639,038 to 639,244 GFF2582
Group Condition GFF2578 GFF2579 GFF2580 GFF2581 GFF2582
vitamin M9 with Supernatant from Cyptococcus -2.4 +0.4 +0.2 N.D. -1.0
complex community Community=arabino-guar; Passage=4 -0.5 -0.3 -0.3 N.D. -1.2
vitamin M9 with Supernatant from Cyptococcus -1.9 +0.5 +0.0 N.D. -0.8
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -1.5 -0.2 -0.1 N.D. -0.3
vitamin M9 with Supernatant from Cyptococcus -1.6 +0.2 -0.2 N.D. -0.4
vitamin M9 with Supernatant from Cyptococcus -1.9 +0.5 -0.0 N.D. -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -1.1 -0.4 -0.3 N.D. +0.0
complex community Community=arabino-guar; Passage=4 -0.8 +0.4 -0.3 N.D. -1.1
vitamin M9 with Supernatant from Cyptococcus -1.6 +0.6 +0.1 N.D. -0.8
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -1.5 -0.1 -0.0 N.D. +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.7 -0.3 -0.4 N.D. -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.7 -0.4 -0.1 N.D. -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.9 -0.3 +0.0 N.D. -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.9 -0.3 -0.1 N.D. -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.8 -0.3 -0.1 N.D. -0.0
complex community Community=arabino-guar; Passage=4 -0.6 -0.3 -0.0 N.D. -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.6 -0.2 -0.3 N.D. -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.6 -0.2 +0.0 N.D. -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.6 -0.3 -0.2 N.D. -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.6 -0.5 +0.1 N.D. -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.5 -0.2 -0.0 N.D. -0.3
phage phage_bap4 -0.7 +0.1 +0.0 N.D. -0.5
complex community Community=arabino-guar; Passage=4 -0.9 +0.1 -0.3 N.D. +0.3
no phage control no phage control -0.5 +0.1 +0.1 N.D. -0.3
complex community Community=Locust bean gum; Passage=4 +0.3 -0.1 +0.1 N.D. -0.7
complex community Community=Locust bean gum; Passage=4 -0.1 +0.4 -0.0 N.D. -0.6
no phage control no phage control -0.6 +0.2 +0.3 N.D. -0.1
complex community Community=Kojac gum; Passage=4 -0.5 -0.2 +0.1 N.D. +0.4
complex community Community=Locust bean gum; Passage=4 -0.3 +0.4 +0.1 N.D. -0.3
complex community Community=guar; Passage=4 +0.4 +0.2 -0.4 N.D. -0.2
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