Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF256 and GFF257 are separated by 16 nucleotidesGFF257 and GFF258 overlap by 4 nucleotidesGFF258 and GFF259 are separated by 168 nucleotidesGFF259 and GFF260 are separated by 29 nucleotides GFF256 - Twitching motility protein PilT, at 287,919 to 289,067 GFF256 GFF257 - N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18), at 289,084 to 290,265 GFF257 GFF258 - Ribosomal protein L3 N(5)-glutamine methyltransferase (EC 2.1.1.298), at 290,262 to 291,140 GFF258 GFF259 - Bis-ABC ATPase YheS, at 291,309 to 293,309 GFF259 GFF260 - FIG00931356: hypothetical protein, at 293,339 to 293,842 GFF260
Group Condition GFF256 GFF257 GFF258 GFF259 GFF260
phage phage_bap4 -0.2 N.D. -0.1 -0.2 -0.0
phage phage_bap4 -0.2 N.D. -0.2 -0.0 -0.1
phage phage_bap4 -0.4 N.D. -0.1 +0.0 +0.0
phage phage_bap4 -0.2 N.D. +0.1 -0.1 -0.1
phage phage_bap4 -0.2 N.D. +0.0 -0.1 -0.1
phage phage_bap4 -0.2 N.D. +0.0 -0.0 -0.1
complex community Community=guar; Passage=4 -0.2 N.D. +0.3 -0.0 -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.0 N.D. +0.1 -0.2 -0.1
complex community Community=Locust bean gum; Passage=4 -0.1 N.D. -0.3 -0.1 +0.3
vitamin M9 with Supernatant from Cyptococcus +0.0 N.D. -0.3 -0.0 +0.2
complex community Community=guar; Passage=4 -0.3 N.D. -0.1 +0.1 +0.2
phage phage_bap4 -0.2 N.D. +0.0 +0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.0 N.D. +0.1 +0.1 -0.2
complex community Community=Locust bean gum; Passage=1 +0.1 N.D. +0.1 -0.0 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 N.D. +0.2 -0.1 -0.0
complex community Community=Locust bean gum; Passage=4 -0.3 N.D. -0.1 +0.3 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 N.D. -0.0 +0.2 -0.1
vitamin M9 with Supernatant from Cyptococcus +0.1 N.D. -0.1 +0.1 +0.1
complex community Community=guar; Passage=4 +0.0 N.D. -0.1 +0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 N.D. +0.2 -0.0 +0.0
complex community Community=arabino-guar; Passage=4 +0.2 N.D. -0.3 +0.2 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 N.D. +0.1 -0.0 -0.1
complex community Community=Kojac gum; Passage=4 +0.2 N.D. +0.1 +0.2 -0.2
complex community Community=arabino-guar; Passage=4 +0.1 N.D. -0.1 +0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 N.D. +0.1 +0.2 -0.0
complex community Community=arabino-guar; Passage=4 -0.1 N.D. -0.0 +0.5 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 N.D. +0.0 +0.0 +0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 N.D. +0.1 +0.0 +0.1
complex community Community=guar; Passage=4 -0.1 N.D. +0.5 +0.2 -0.2
complex community Community=Locust bean gum; Passage=4 -0.2 N.D. +0.4 +0.4 +0.2
remove
GFF256
plot		 remove
GFF257
plot		 remove
GFF258		 remove
GFF259
plot		 remove
GFF260
plot