Fitness for 5 genes in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

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500 ntGFF2559 and GFF2560 are separated by 13 nucleotidesGFF2560 and GFF2561 are separated by 22 nucleotidesGFF2561 and GFF2562 are separated by 159 nucleotidesGFF2562 and GFF2563 are separated by 524 nucleotides GFF2559 - Formate dehydrogenase N beta subunit (EC 1.2.1.2), at 75,161 to 76,045 GFF2559 GFF2560 - Formate dehydrogenase N alpha subunit (EC 1.2.1.2) @ selenocysteine-containing, at 76,059 to 79,106 GFF2560 GFF2561 - hypothetical protein, at 79,129 to 79,281 GFF2561 GFF2562 - Permease of the drug/metabolite transporter (DMT) superfamily, at 79,441 to 80,265 GFF2562 GFF2563 - Outer membrane porin protein NmpC precursor, at 80,790 to 81,878 GFF2563
Group Condition GFF2559 GFF2560 GFF2561 GFF2562 GFF2563
phage LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI +0.5 -0.2 -1.0 -0.1 -1.1
phage LB_plus_SM_buffer with 6D2_phage 15 MOI +0.0 -0.2 -0.3 -0.4 -0.6
phage LB_plus_SM_buffer with 6C2_phage 15 MOI -0.0 -0.0 -0.4 -0.6 -0.2
phage LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI +0.0 -0.3 -0.2 -0.5 -0.3
phage LB_plus_SM_buffer with 8C2_phage 15 MOI +0.5 -0.1 -0.5 -0.6 -0.6
phage LB_plus_SM_buffer with S16_phage 15 MOI +0.2 -0.1 -0.7 -0.1 -0.4
phage LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI +0.0 -0.1 -0.3 -0.5 -0.2
nophagecontrol No phage control -0.4 -0.2 -0.3 -0.3 +0.2
phage 6F2_phage 15 MOI +0.3 -0.2 -0.4 -0.3 -0.4
phage 6F2_phage 15 MOI -0.0 -0.1 -0.7 +0.2 -0.1
phage LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI +0.2 -0.2 -0.5 -0.4 +0.1
phage LB_plus_SM_buffer with Br60_phage 0.0000005 MOI +0.3 -0.1 -0.3 -0.0 -0.4
phage LB_plus_SM_buffer with 6C2_phage 0.25 MOI -0.1 +0.0 -0.3 -0.5 +0.3
phage LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI +0.1 -0.2 +0.4 -0.8 -0.0
phage LB_plus_SM_buffer with 6F2_phage 0.1875 MOI -0.6 +0.0 +0.6 +0.0 -0.4
phage LB_plus_SM_buffer with FelixO1_phage 0.5 MOI +0.1 +0.1 +0.0 -0.7 +0.2
phage phi19h1_phage 15 MOI -0.3 -0.1 -0.1 -0.3 +0.4
phage LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI +0.2 -0.3 +0.4 -0.5 -0.1
phage LB_plus_SM_buffer with 6F2_phage 1.875 MOI -0.4 -0.1 -0.3 +0.3 +0.3
phage LB_plus_SM_buffer with FelixO1_phage 0.05 MOI -0.0 -0.1 +0.3 -0.5 +0.3
phage Ffm_phage 10 MOI; agar plate assay -0.5 -0.1 +0.1 +0.2 +0.4
phage LB_plus_SM_buffer with FelixO1_phage (wt new) 0.075 MOI -0.2 -0.1 +0.4 -0.1 +0.3
phage phi19h1_phage 15 MOI -0.2 -0.1 +0.7 -0.1 +0.0
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.3 -0.1 +0.6 +0.4 -0.3
phage LB_plus_SM_buffer with 6F2_phage 0.0001875 MOI -0.3 -0.1 +0.2 +0.3 +0.2
phage LB_plus_SM_buffer with Br60_phage 0.0005 MOI +0.3 +0.4 -1.2 +1.2 -0.2
phage phi19h1_phage 15 MOI -0.1 -0.0 +0.5 -0.3 +0.5
phage LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI +0.7 +0.1 +0.4 -0.2 -0.1
phage LB_plus_SM_buffer with 8C2_phage 15 MOI +0.5 -0.1 +0.9 -0.1 -0.1
phage LB_plus_SM_buffer with ES18h1_phage 0.75 MOI -0.2 +0.3 -0.0 +0.3 +1.0
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