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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Hydrogenophaga sp. GW460-11-11-14-LB1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF2545 and GFF2546 overlap by 8 nucleotides
GFF2546 and GFF2547 overlap by 4 nucleotides
GFF2547 and GFF2548 overlap by 4 nucleotides
GFF2548 and GFF2549 are separated by 17 nucleotides
GFF2545 - putative NADH dehydrogenase/NAD(P)H nitroreductase, at 132,858 to 133,814
GFF2545
GFF2546 - Colanic acid biosynthesis acetyltransferase WcaF (EC 2.3.1.-), at 133,807 to 134,379
GFF2546
GFF2547 - hypothetical protein, at 134,376 to 135,527
GFF2547
GFF2548 - Glycosyltransferase (EC 2.4.1.-), at 135,524 to 136,636
GFF2548
GFF2549 - hypothetical protein, at 136,654 to 137,640
GFF2549
Group
Condition
GFF2545
GFF2546
GFF2547
GFF2548
GFF2549
carbon source
Ying_Others16 rep C; time point 2
-0.5
-0.2
-0.1
-0.2
+0.0
carbon source
Ying_AminoAcid20 rep B; time point 1
-0.4
+0.1
-0.4
-0.1
-0.2
carbon source
Ying_Others16 rep A; time point 3
-0.2
-0.4
-0.1
-0.0
+0.0
carbon source
Ying_all64 rep A; time point 1
-0.4
-0.0
+0.0
-0.2
-0.0
carbon source
Ying_Others16 rep B; time point 2
-0.4
+0.0
-0.2
-0.1
+0.1
carbon source
Ying_AminoAcid20 rep C; time point 3
-0.1
-0.2
-0.1
+0.1
-0.2
carbon source
Ying_all64 rep B; time point 2
-0.3
+0.2
-0.2
-0.2
+0.0
carbon source
Ying_sugar7 rep B; time point 3
+0.2
-0.2
-0.2
-0.2
+0.0
carbon source
Ying_OrganicAcid7 rep C; time point 1
-0.2
+0.1
-0.0
-0.2
-0.2
carbon source
Ying_all64 rep B; time point 3
-0.2
+0.2
-0.2
-0.0
-0.2
carbon source
Ying_all64 rep C; time point 2
+0.2
-0.4
-0.4
+0.2
-0.1
carbon source
Ying_sugar7 rep A; time point 2
-0.3
+0.2
-0.2
+0.0
-0.1
carbon source
Ying_sugar7 rep A; time point 3
-0.1
-0.3
+0.1
-0.2
+0.0
carbon source
Ying_all64 rep C; time point 1
-0.1
+0.1
-0.2
-0.1
-0.0
carbon source
Ying_Others16 rep A; time point 2
-0.3
+0.1
-0.2
+0.0
+0.0
carbon source
Ying_Nucleobase14 rep A; time point 2
-0.7
+0.3
+0.2
+0.0
-0.1
carbon source
Ying_all64 rep A; time point 2
-0.0
+0.2
-0.5
-0.0
+0.1
carbon source
Ying_Nucleobase14 rep B; time point 1
-0.4
+0.2
-0.1
+0.1
-0.1
carbon source
Ying_sugar7 rep C; time point 3
+0.0
-0.5
-0.0
+0.3
+0.0
carbon source
Ying_AminoAcid20 rep C; time point 1
-0.3
+0.1
-0.0
+0.2
-0.1
carbon source
Ying_OrganicAcid7 rep C; time point 2
-0.3
+0.2
-0.1
+0.2
-0.1
carbon source
Ying_sugar7 rep C; time point 1
-0.4
+0.2
-0.1
+0.1
+0.2
carbon source
Ying_Nucleobase14 rep C; time point 1
-0.3
-0.2
+0.2
+0.2
+0.0
carbon source
Ying_OrganicAcid7 rep A; time point 3
+0.1
-0.4
-0.1
+0.2
+0.2
carbon source
Ying_AminoAcid20 rep A; time point 2
-0.3
-0.0
+0.1
+0.1
+0.2
carbon source
Ying_Others16 rep C; time point 3
+0.2
-0.2
+0.0
+0.2
-0.1
carbon source
Ying_AminoAcid20 rep A; time point 3
+0.1
-0.2
+0.1
+0.2
-0.1
carbon source
Ying_all64 rep A; time point 3
-0.1
+0.2
+0.0
+0.2
-0.0
carbon source
Ying_sugar7 rep C; time point 2
+0.0
+0.1
+0.1
+0.3
-0.1
carbon source
Ying_all64 rep C; time point 3
+0.2
+0.0
-0.1
+0.5
-0.1
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