Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2544 and GFF2545 overlap by 4 nucleotidesGFF2545 and GFF2546 are separated by 13 nucleotidesGFF2546 and GFF2547 are separated by 105 nucleotidesGFF2547 and GFF2548 are separated by 9 nucleotides GFF2544 - Ubiquinone biosynthesis protein UbiJ, at 607,209 to 607,778 GFF2544 GFF2545 - Ubiquinone biosynthesis regulatory protein kinase UbiB, at 607,775 to 609,340 GFF2545 GFF2546 - sodium-solute symporter, putative, at 609,354 to 610,805 GFF2546 GFF2547 - Type I antifreeze protein, at 610,911 to 611,255 GFF2547 GFF2548 - Uncharacterized membrane anchored protein Mext_4159, at 611,265 to 611,897 GFF2548
Group Condition GFF2544 GFF2545 GFF2546 GFF2547 GFF2548
complex community Community=arabino-guar; Passage=4 N.D. N.D. +0.0 -3.0 -0.3
complex community Community=Locust bean gum; Passage=4 N.D. N.D. -0.1 -2.6 -0.0
complex community Community=guar; Passage=4 N.D. N.D. -0.3 -2.4 +0.1
complex community Community=arabino-guar; Passage=4 N.D. N.D. -0.1 -2.2 -0.3
complex community Community=guar; Passage=4 N.D. N.D. -0.2 -0.9 -0.8
phage phage_bap4 N.D. N.D. -0.1 -1.6 -0.1
phage phage_bap4 N.D. N.D. -0.1 -1.2 -0.3
no phage control no phage control N.D. N.D. -0.3 -0.9 +0.1
phage phage_bap4 N.D. N.D. +0.0 -1.0 -0.0
complex community Community=arabino-guar; Passage=4 N.D. N.D. -0.3 -0.7 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. N.D. -0.0 -0.7 -0.1
no phage control no phage control N.D. N.D. -0.1 -0.6 -0.2
phage phage_bap4 N.D. N.D. -0.1 -0.4 -0.3
complex community Community=Locust bean gum; Passage=4 N.D. N.D. -0.1 -0.5 -0.2
phage phage_bap4 N.D. N.D. -0.1 -0.5 -0.1
phage phage_bap4 N.D. N.D. -0.1 -0.3 -0.4
phage phage_bap4 N.D. N.D. -0.1 -0.4 -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. N.D. -0.2 -0.4 -0.1
phage phage_bap4 N.D. N.D. -0.1 -0.6 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL N.D. N.D. +0.1 -0.6 +0.1
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. +0.2 -0.6 +0.1
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. +0.2 -0.6 +0.1
complex community Community=Locust bean gum; Passage=4 N.D. N.D. +0.0 +0.5 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL N.D. N.D. +0.0 +0.5 -0.1
complex community Community=Locust bean gum; Passage=4 N.D. N.D. +0.2 +0.6 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. +0.1 +0.6 +0.0
complex community Community=arabino-guar; Passage=4 N.D. N.D. -0.2 +1.7 -0.8
complex community Community=Kojac gum; Passage=4 N.D. N.D. -0.1 +1.5 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. N.D. +0.0 +0.7 +0.4
complex community Community=guar; Passage=4 N.D. N.D. -0.3 +1.6 +0.1
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