Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2539 and GFF2540 overlap by 4 nucleotidesGFF2540 and GFF2541 overlap by 1 nucleotidesGFF2541 and GFF2542 are separated by 113 nucleotidesGFF2542 and GFF2543 are separated by 32 nucleotides GFF2539 - FAD/FMN-containing dehydrogenases, at 600,434 to 604,312 GFF2539 GFF2540 - Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases, at 604,309 to 604,755 GFF2540 GFF2541 - FIG00899427: hypothetical protein, at 604,755 to 605,168 GFF2541 GFF2542 - 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase (EC 2.1.1.201), at 605,282 to 606,013 GFF2542 GFF2543 - Uncharacterized membrane protein Bcep18194_A6058, at 606,046 to 607,077 GFF2543
Group Condition GFF2539 GFF2540 GFF2541 GFF2542 GFF2543
complex community Community=arabino-guar; Passage=4 -1.0 -0.6 -0.5 N.D. -1.4
complex community Community=Kojac gum; Passage=4 -0.4 +0.1 +0.1 N.D. -3.0
complex community Community=guar; Passage=4 -0.8 -0.4 -0.2 N.D. -1.5
complex community Community=arabino-guar; Passage=4 -0.6 -0.7 -0.3 N.D. -1.2
complex community Community=arabino-guar; Passage=4 -0.7 -1.2 +0.0 N.D. -0.8
complex community Community=Locust bean gum; Passage=4 -0.6 -0.9 +0.1 N.D. -1.4
complex community Community=Locust bean gum; Passage=4 -0.3 -0.8 +0.1 N.D. -1.6
complex community Community=guar; Passage=4 -0.8 -0.5 -0.1 N.D. -0.8
complex community Community=Locust bean gum; Passage=4 -0.2 -0.5 +0.1 N.D. -1.3
complex community Community=arabino-guar; Passage=4 -0.6 -0.6 +0.1 N.D. -0.5
complex community Community=guar; Passage=4 -0.8 +0.5 -0.3 N.D. -0.9
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 -0.3 -0.1 N.D. -0.5
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.4 -0.0 N.D. -0.6
complex community Community=guar; Passage=4 -1.0 +0.6 +0.0 N.D. -0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 -0.3 -0.0 N.D. -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 -0.3 +0.1 N.D. -0.7
no phage control no phage control +0.1 -0.5 -0.1 N.D. -0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 +0.1 +0.0 N.D. -0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 -0.1 +0.1 N.D. -0.6
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 -0.3 +0.1 N.D. -0.6
vitamin M9 with Supernatant from Cyptococcus -0.2 +0.1 -0.1 N.D. -0.5
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.2 +0.2 N.D. -0.6
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 +0.4 -0.0 N.D. -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 +0.4 +0.1 N.D. -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 +0.4 +0.1 N.D. -0.5
complex community Community=Locust bean gum; Passage=4 -0.2 +0.6 +0.3 N.D. -0.8
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.3 +0.2 N.D. -0.4
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.5 +0.1 N.D. -0.5
complex community Community=Locust bean gum; Passage=1 +0.1 +0.5 -0.1 N.D. -0.3
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.1 +0.4 -0.0 N.D. -0.3
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