Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF2538 and GFF2539 are separated by 157 nucleotidesGFF2539 and GFF2540 are separated by 408 nucleotidesGFF2540 and GFF2541 are separated by 13 nucleotidesGFF2541 and GFF2542 overlap by 4 nucleotides GFF2538 - hypothetical protein, at 124,791 to 124,943 GFF2538 GFF2539 - Membrane-bound lytic murein transglycosylase A precursor (EC 3.2.1.-), at 125,101 to 126,141 GFF2539 GFF2540 - Tyrosine-protein kinase EpsD (EC 2.7.10.2), at 126,550 to 128,937 GFF2540 GFF2541 - GumB protein, at 128,951 to 129,688 GFF2541 GFF2542 - Colanic acid biosysnthesis glycosyl transferase WcaI, at 129,685 to 130,968 GFF2542
Group Condition GFF2538 GFF2539 GFF2540 GFF2541 GFF2542
carbon source Ying_OrganicAcid7 rep B; time point 3 N.D. -2.4 -0.1 +0.0 -0.4
carbon source Ying_OrganicAcid7 rep C; time point 2 N.D. -2.3 +0.1 -0.1 -0.5
carbon source Ying_OrganicAcid7 rep A; time point 2 N.D. -2.4 -0.1 -0.1 -0.0
carbon source Ying_OrganicAcid7 rep A; time point 1 N.D. -1.8 +0.1 -0.2 -0.3
carbon source Ying_Nucleobase14 rep A; time point 1 N.D. -0.2 +0.2 -0.5 -1.5
carbon source Ying_OrganicAcid7 rep B; time point 2 N.D. -2.0 +0.0 +0.1 +0.3
carbon source Ying_OrganicAcid7 rep C; time point 1 N.D. -1.7 +0.0 +0.2 -0.0
carbon source Ying_Others16 rep A; time point 2 N.D. -0.8 +0.0 -0.3 -0.3
carbon source Ying_sugar7 rep C; time point 1 N.D. -0.7 -0.0 -0.4 -0.1
carbon source Ying_OrganicAcid7 rep A; time point 3 N.D. -1.8 +0.2 +0.1 +0.3
carbon source Ying_Nucleobase14 rep C; time point 2 N.D. -0.8 +0.1 -0.0 -0.6
carbon source Ying_OrganicAcid7 rep C; time point 3 N.D. -1.8 +0.1 +0.0 +0.3
carbon source Ying_sugar7 rep C; time point 2 N.D. -0.5 -0.1 -0.2 -0.2
carbon source Ying_Nucleobase14 rep C; time point 1 N.D. -1.0 +0.1 -0.0 -0.1
carbon source Ying_Others16 rep B; time point 3 N.D. -0.8 -0.2 -0.2 +0.2
carbon source Ying_all64 rep A; time point 3 N.D. -0.5 -0.1 -0.4 +0.1
carbon source Ying_OrganicAcid7 rep B; time point 1 N.D. -0.9 +0.2 +0.1 -0.0
carbon source Ying_all64 rep B; time point 3 N.D. -0.9 -0.1 +0.3 +0.2
carbon source Ying_sugar7 rep A; time point 1 N.D. -0.6 +0.1 -0.2 +0.3
carbon source Ying_sugar7 rep A; time point 3 N.D. -0.7 -0.0 -0.1 +0.5
carbon source Ying_Nucleobase14 rep B; time point 2 N.D. -0.8 +0.0 -0.1 +0.6
carbon source Ying_sugar7 rep C; time point 3 N.D. -0.6 -0.0 -0.1 +0.6
carbon source Ying_sugar7 rep B; time point 1 N.D. -0.7 +0.2 -0.0 +0.3
carbon source Ying_Nucleobase14 rep A; time point 2 N.D. -0.6 +0.4 -0.1 +0.0
carbon source Ying_Others16 rep A; time point 3 N.D. -0.7 +0.1 +0.1 +0.3
carbon source Ying_all64 rep A; time point 2 N.D. -0.7 +0.2 +0.1 +0.2
carbon source Ying_AminoAcid20 rep C; time point 3 N.D. -0.4 +0.1 -0.3 +0.5
carbon source Ying_Others16 rep B; time point 1 N.D. -0.1 +0.3 +0.3 -0.5
carbon source Ying_all64 rep A; time point 1 N.D. -0.4 +0.1 +0.2 +0.4
carbon source Ying_all64 rep C; time point 1 N.D. +0.2 +0.2 -0.1 +0.4
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