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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF2526 and GFF2527 are separated by 7 nucleotides
GFF2527 and GFF2528 overlap by 1 nucleotides
GFF2528 and GFF2529 overlap by 1 nucleotides
GFF2529 and GFF2530 are separated by 82 nucleotides
GFF2526 - no description, at 586,981 to 587,259
GFF2526
GFF2527 - GCN5-related N-acetyltransferase, at 587,267 to 587,794
GFF2527
GFF2528 - ABC transporter, ATP-binding protein PA3838, at 587,794 to 588,588
GFF2528
GFF2529 - ABC transporter, permease protein PA3837, at 588,588 to 589,484
GFF2529
GFF2530 - ABC transporter, substrate-binding protein PA3836, at 589,567 to 590,511
GFF2530
Group
Condition
GFF2526
GFF2527
GFF2528
GFF2529
GFF2530
complex community
Community=Locust bean gum; Passage=4
-1.0
+0.0
-0.7
-0.5
+0.1
complex community
Community=arabino-guar; Passage=4
-0.8
+0.1
+0.3
-0.2
-0.4
phage
phage_bap4
+0.0
-0.2
-0.6
-0.1
+0.0
complex community
Community=Kojac gum; Passage=4
-0.5
-0.1
-0.5
+0.3
+0.0
complex community
Community=arabino-guar; Passage=4
-0.1
-0.4
-0.5
+0.4
-0.1
complex community
Community=Kojac gum; Passage=1
-0.7
+0.2
-0.2
+0.0
-0.1
complex community
Community=Locust bean gum; Passage=4
+0.2
+0.3
-0.9
+0.0
-0.0
phage
phage_bap4
+0.3
+0.0
-0.3
+0.2
+0.2
complex community
Community=guar; Passage=4
-0.2
-0.2
+0.3
+0.6
-0.2
complex community
Community=arabino-guar; Passage=4
+0.6
+0.3
-0.2
-0.0
-0.2
vitamin
M9 with Supernatant from Cyptococcus
-0.0
+0.2
-0.2
+0.3
+0.2
vitamin
M9 with Supernatant from Cyptococcus
+0.3
+0.2
-0.3
+0.2
+0.2
complex community
Community=Locust bean gum; Passage=4
-0.6
+0.4
+0.9
-0.1
-0.1
complex community
Community=guar; Passage=4
-0.1
-0.1
+0.5
+0.0
+0.2
complex community
Community=Locust bean gum; Passage=1
-0.1
+0.1
+0.5
+0.2
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.2
+0.2
+0.1
+0.3
-0.2
vitamin
M9 with Supernatant from Cyptococcus
-0.1
+0.2
+0.2
+0.2
+0.1
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.0
+0.2
+0.6
+0.0
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.1
+0.2
+0.4
+0.3
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.0
-0.0
+0.5
+0.5
+0.0
vitamin
M9 with Supernatant from Cyptococcus
+0.1
-0.0
+0.5
+0.1
+0.3
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.2
+0.2
+0.3
+0.1
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.6
-0.1
+0.2
+0.3
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.0
-0.1
+1.0
+0.1
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.1
+0.0
+0.6
+0.3
+0.1
complex community
Community=guar; Passage=4
-0.2
+0.2
+0.9
+0.2
-0.0
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
+0.3
+0.2
+0.3
+0.2
+0.2
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
+0.3
+0.1
+0.5
+0.3
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.2
+0.1
+0.8
+0.2
+0.1
complex community
Community=Locust bean gum; Passage=4
-0.0
+0.4
+0.8
+0.8
+0.0
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