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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF2521 and GFF2522 are separated by 16 nucleotides
GFF2522 and GFF2523 are separated by 29 nucleotides
GFF2523 and GFF2524 overlap by 1 nucleotides
GFF2524 and GFF2525 are separated by 96 nucleotides
GFF2521 - FIG00931781: hypothetical protein, at 582,667 to 583,185
GFF2521
GFF2522 - Glutaredoxin-related protein, at 583,202 to 583,531
GFF2522
GFF2523 - Peptide chain release factor N(5)-glutamine methyltransferase (EC 2.1.1.297), at 583,561 to 584,412
GFF2523
GFF2524 - Peptide chain release factor 1, at 584,412 to 585,500
GFF2524
GFF2525 - Glutamyl-tRNA reductase (EC 1.2.1.70), at 585,597 to 586,868
GFF2525
Group
Condition
GFF2521
GFF2522
GFF2523
GFF2524
GFF2525
complex community
Community=arabino-guar; Passage=4
+0.2
-2.1
-2.8
N.D.
N.D.
complex community
Community=arabino-guar; Passage=4
+0.3
-2.1
-2.5
N.D.
N.D.
complex community
Community=arabino-guar; Passage=4
+0.2
-1.9
-2.5
N.D.
N.D.
complex community
Community=guar; Passage=4
-0.0
-1.3
-2.7
N.D.
N.D.
complex community
Community=arabino-guar; Passage=4
+0.0
-1.5
-2.5
N.D.
N.D.
complex community
Community=Locust bean gum; Passage=4
-0.1
-1.2
-2.5
N.D.
N.D.
complex community
Community=guar; Passage=4
+0.2
-1.9
-1.9
N.D.
N.D.
complex community
Community=Locust bean gum; Passage=4
-0.1
-1.0
-2.5
N.D.
N.D.
complex community
Community=Kojac gum; Passage=4
+0.1
-1.3
-2.3
N.D.
N.D.
complex community
Community=guar; Passage=4
+0.3
-1.2
-2.4
N.D.
N.D.
complex community
Community=Locust bean gum; Passage=4
-0.0
-0.9
-2.2
N.D.
N.D.
complex community
Community=guar; Passage=4
+0.1
-1.0
-1.8
N.D.
N.D.
no phage control
no phage control
-0.1
-0.1
-2.1
N.D.
N.D.
complex community
Community=Locust bean gum; Passage=4
+0.2
-0.7
-1.8
N.D.
N.D.
no phage control
no phage control
-0.0
-0.1
-1.5
N.D.
N.D.
phage
phage_bap4
+0.0
-0.2
-1.5
N.D.
N.D.
phage
phage_bap4
-0.1
-0.2
-1.3
N.D.
N.D.
phage
phage_bap4
+0.0
-0.4
-0.9
N.D.
N.D.
no phage control
no phage control
-0.1
+0.1
-1.0
N.D.
N.D.
no phage control
no phage control
-0.1
-0.2
-0.7
N.D.
N.D.
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.0
-0.3
-0.6
N.D.
N.D.
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.2
-0.1
-0.6
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.1
-0.3
+0.7
N.D.
N.D.
phage
phage_bap4
-0.1
-0.2
+1.1
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.1
+0.1
+0.6
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.2
+0.3
+0.4
N.D.
N.D.
phage
phage_bap4
-0.1
-0.1
+1.1
N.D.
N.D.
phage
phage_bap4
-0.2
-0.1
+1.2
N.D.
N.D.
phage
phage_bap4
-0.2
-0.2
+1.3
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.1
+0.1
+0.8
N.D.
N.D.
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