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Cofit
Protein
Homologs
Fitness for 5 genes in
Hydrogenophaga sp. GW460-11-11-14-LB1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF2520 and GFF2521 are separated by 13 nucleotides
GFF2521 and GFF2522 are separated by 7 nucleotides
GFF2522 and GFF2523 overlap by 4 nucleotides
GFF2523 and GFF2524 are separated by 9 nucleotides
GFF2520 - Glutathione S-transferase family protein, at 103,530 to 104,144
GFF2520
GFF2521 - FIG002994: Putative transcriptional regulator, at 104,158 to 104,598
GFF2521
GFF2522 - Oxidoreductase, short-chain dehydrogenase/reductase family (EC 1.1.1.-), at 104,606 to 105,457
GFF2522
GFF2523 - FIG002577: Putative lipoprotein precursor, at 105,454 to 105,993
GFF2523
GFF2524 - FIG097052: Sugar transporter, at 106,003 to 107,319
GFF2524
Group
Condition
GFF2520
GFF2521
GFF2522
GFF2523
GFF2524
carbon source
Ying_Nucleobase14 rep A; time point 1
-0.7
+0.0
-0.2
+0.0
-0.5
carbon source
Ying_Nucleobase14 rep B; time point 2
-0.6
-0.0
+0.0
-0.1
-0.0
carbon source
Ying_OrganicAcid7 rep A; time point 2
-0.1
-0.3
-0.2
+0.0
+0.0
carbon source
Ying_Nucleobase14 rep C; time point 1
-0.3
-0.2
-0.1
+0.1
-0.0
carbon source
Ying_AminoAcid20 rep A; time point 2
-0.2
+0.1
-0.1
-0.1
-0.1
carbon source
Ying_AminoAcid20 rep B; time point 1
-0.2
-0.2
-0.2
+0.0
+0.2
carbon source
Ying_OrganicAcid7 rep C; time point 2
+0.2
-0.2
-0.1
-0.2
-0.1
carbon source
Ying_AminoAcid20 rep C; time point 3
-0.3
-0.1
-0.0
+0.0
+0.1
carbon source
Ying_sugar7 rep C; time point 3
-0.1
-0.1
+0.1
-0.3
+0.1
carbon source
Ying_Nucleobase14 rep B; time point 1
-0.2
-0.3
+0.1
+0.0
+0.1
carbon source
Ying_sugar7 rep B; time point 2
+0.4
-0.3
-0.1
-0.1
-0.2
carbon source
Ying_all64 rep B; time point 2
+0.1
-0.2
-0.1
-0.1
+0.1
carbon source
Ying_sugar7 rep A; time point 3
-0.3
-0.1
+0.1
-0.1
+0.1
carbon source
Ying_OrganicAcid7 rep B; time point 2
+0.1
-0.1
+0.1
-0.2
-0.0
carbon source
Ying_Others16 rep B; time point 2
+0.2
-0.2
-0.1
-0.1
+0.1
carbon source
Ying_all64 rep A; time point 2
+0.2
-0.2
+0.2
-0.0
-0.1
carbon source
Ying_all64 rep C; time point 1
+0.3
-0.1
-0.1
+0.0
-0.1
carbon source
Ying_AminoAcid20 rep C; time point 2
-0.2
+0.0
-0.1
+0.2
+0.1
carbon source
Ying_Others16 rep B; time point 1
+0.2
-0.2
+0.0
-0.1
+0.1
carbon source
Ying_Others16 rep C; time point 3
-0.2
+0.0
+0.3
-0.2
+0.1
carbon source
Ying_sugar7 rep C; time point 2
+0.2
-0.2
-0.0
+0.1
-0.0
carbon source
Ying_Others16 rep A; time point 1
+0.3
-0.1
-0.0
+0.0
-0.1
carbon source
Ying_all64 rep C; time point 3
+0.1
+0.0
-0.1
-0.2
+0.3
carbon source
Ying_Others16 rep A; time point 3
+0.2
-0.1
-0.1
+0.1
-0.1
carbon source
Ying_all64 rep C; time point 2
+0.4
-0.0
-0.1
-0.2
+0.1
carbon source
Ying_OrganicAcid7 rep C; time point 3
-0.2
+0.1
+0.2
+0.0
+0.2
carbon source
Ying_Others16 rep B; time point 3
+0.2
-0.1
+0.1
-0.2
+0.2
carbon source
Ying_sugar7 rep A; time point 1
+0.3
-0.2
+0.3
-0.1
+0.1
carbon source
Ying_OrganicAcid7 rep B; time point 3
+0.2
+0.0
+0.1
+0.0
+0.3
carbon source
Ying_OrganicAcid7 rep B; time point 1
+0.4
+0.1
+0.1
-0.0
+0.2
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