Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_12835	PS417_12840	PS417_12845	PS417_12850	PS417_12855
carbon source	NAG (C)	-0.0	-1.6	-0.1	N.D.	-5.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.3	-0.8	-0.2	N.D.	-5.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.1	-1.1	-0.5	N.D.	-5.4
carbon source	NAG (C)	+0.1	-1.2	+0.1	N.D.	-5.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.1	-0.7	-0.5	N.D.	-5.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.2	-0.4	+0.0	N.D.	-5.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.1	-1.0	+0.0	N.D.	-5.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.1	-0.4	-0.1	N.D.	-5.7
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.2	-3.2	-0.3	N.D.	-3.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.0	+0.6	-1.0	N.D.	-5.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.4	-0.9	+0.3	N.D.	-5.3
nitrogen source	Putrescine (N)	+0.3	-0.5	-0.1	N.D.	-5.8
carbon source	Inosine (C)	+0.2	-0.8	+0.1	N.D.	-5.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.2	-0.3	+0.2	N.D.	-5.6
carbon source	D-Gluconic Acid (C)	+0.1	-0.5	-0.1	N.D.	-5.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.0	-0.1	+0.1	N.D.	-5.9
carbon source	D-Trehalose (C)	-0.0	-0.8	+0.1	N.D.	-5.2
carbon source	octanoate (C)	+0.2	-0.7	+0.1	N.D.	-5.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.3	-0.1	-0.1	N.D.	-5.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.0	+0.1	+0.2	N.D.	-5.6
carbon source	octanoate (C)	-0.1	-1.2	+0.4	N.D.	-4.4
supernatant	LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x	+0.3	-1.3	-0.0	N.D.	-4.3
carbon source	Inosine (C)	+0.3	-0.6	-0.1	N.D.	-5.0
carbon source	Uridine (C)	-0.2	-0.4	+0.2	N.D.	-4.9
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4	-2.5	-0.1	N.D.	-3.1
supernatant	LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	+0.0	-1.2	+0.2	N.D.	-4.2
nitrogen source	Adenine (N)	+0.3	-0.1	-0.2	N.D.	-5.2
carbon source	D-Xylose (C)	+0.2	-0.5	+0.2	N.D.	-5.0
carbon source	L-Valine (C)	+0.3	-0.7	+1.1	N.D.	-5.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.0	-0.3	+0.8	N.D.	-4.7