Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 554 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PS417_12815	PS417_12820	PS417_12825	PS417_12830	PS417_12835
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5	-0.5	-1.1	-0.9	-0.2
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.3	-1.0	+0.3	-0.1	-0.1
stress	methylglyoxal 0.032 vol%	-0.4	-0.2	-0.8	+0.4	-0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.4	-0.6	+0.4	-0.7	+0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.2	-1.0	+0.5	-0.2	+0.2
phage	P. simiae OR Antrim MOI 10	-0.2	-0.5	-0.0	+0.5	-0.5
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.4	-0.3	+0.6	-0.2	-0.3
phage	P. simiae ORA MOI 0.1	-0.7	-0.2	+0.0	+0.6	-0.1
soil	soil sample 6; outgrowth in LB	-0.2	-1.0	+1.0	+0.0	-0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	-0.1	-0.2	+0.5	-0.7	+0.2
soil	soil sample 5; outgrowth in LB	-0.7	-0.5	+0.7	+0.4	-0.2
carbon source	L-Valine (C)	-0.1	+0.8	-0.3	-0.9	+0.3
carbon source	L-Asparagine (C)	+0.2	-1.0	-0.1	+0.5	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.3	-1.1	+0.7	+0.5	-0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.6	+0.7	-0.4	+0.3	-0.0
seeds	Growth on radish seeds for 72 hours	-0.2	+0.4	+0.5	+0.0	-0.6
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.0	-0.8	+0.3	+0.3	+0.3
soil	soil sample 8; outgrowth in LB	-0.2	-0.5	+0.8	-0.2	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.2	-0.2	-0.3	+0.7	+0.3
rhizosphere	rhizosphere sample 2; outgrowth in LB	-0.0	+0.1	+1.3	+0.2	-1.1
soil	soil sample 3; outgrowth in LB	-0.5	-0.1	+0.8	+0.4	-0.2
rhizosphere	rhizosphere sample 8; outgrowth in LB	-0.3	+0.0	+1.4	+0.0	-0.3
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.3	-0.1	+1.3	+0.4	-0.1
root	root sample 6; outgrowth in LB	-0.8	+0.1	+1.3	+0.2	+0.6
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.4	+1.0	-0.4	+0.7	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.2	-0.6	+0.9	+0.4	+0.4
soil	soil sample 4; outgrowth in LB	-0.1	+0.4	+1.2	+0.2	+0.1
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.0	-0.1	+0.9	+0.7	+0.4
phage	JP1 MOI 10	+0.2	+0.4	+0.8	+0.5	+0.1
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6	+0.5	+0.9	+0.2	+0.5