Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_12800	PS417_12805	PS417_12810	PS417_12815	PS417_12820
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.2	-3.7	-0.2	-0.2	+0.0
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.1	-2.8	-0.2	-0.4	-0.3
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.1	-2.8	-0.3	-0.2	-0.4
root	root sample 6; outgrowth in LB	+0.4	-3.0	+0.2	-0.8	+0.1
soil	soil sample 5; outgrowth in LB	+0.0	-2.0	+0.1	-0.7	-0.5
soil	soil sample 4; outgrowth in LB	+0.2	-3.0	-0.5	-0.1	+0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.1	-2.4	+0.2	-0.2	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.2	-2.9	-0.0	+0.1	-0.0
soil	soil sample 6; outgrowth in LB	-0.0	-1.5	+0.0	-0.2	-1.0
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.0	-1.8	-0.2	-0.4	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.2	-2.6	+0.2	-0.1	+0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.0	-2.0	+0.1	-0.4	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.2	-2.5	+0.3	+0.0	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.2	-2.1	+0.2	-0.1	-0.3
soil	soil sample 7; outgrowth in LB	+0.1	-2.3	-0.2	-0.1	-0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.3	-2.2	+0.2	-0.2	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.3	-2.1	+0.2	+0.1	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.2	-2.0	+0.2	-0.2	-0.0
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.2	-2.6	-0.3	-0.0	+1.2
rhizosphere	rhizosphere sample 1; outgrowth in LB	+0.2	-1.8	+0.3	-0.3	-0.1
seeds	Growth on radish seeds for 72 hours	+0.2	-1.1	+0.4	-0.5	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.2	-1.6	+0.5	+0.1	-0.2
seeds	Growth on radish seeds for 72 hours	+0.1	-1.8	+1.1	+0.2	-0.1
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	+0.3	-0.5	+1.2	-0.2	-0.4
stress	R2A with Fusaric 120 ug/mL	+0.4	+2.5	-0.1	-0.1	-0.5
stress	R2A with Fusaric 120 ug/mL	+0.5	+2.1	-0.1	+0.1	-0.2
stress	R2A with Fusaric 120 ug/mL	+0.4	+2.2	-0.0	-0.0	-0.2
stress	R2A with Fusaric 120 ug/mL	+0.3	+2.3	+0.2	+0.1	-0.5
stress	R2A with Fusaric 120 ug/mL	+0.4	+2.3	+0.0	-0.0	-0.2
stress	R2A with Fusaric 120 ug/mL	+0.4	+2.3	+0.1	-0.1	-0.2