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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF2509 and GFF2510 are separated by 26 nucleotides
GFF2510 and GFF2511 are separated by 242 nucleotides
GFF2511 and GFF2512 are separated by 246 nucleotides
GFF2512 and GFF2513 are separated by 12 nucleotides
GFF2509 - Type IV fimbrial assembly protein PilC, at 570,141 to 571,370
GFF2509
GFF2510 - Type IV fimbrial assembly, ATPase PilB, at 571,397 to 573,130
GFF2510
GFF2511 - Octaprenyl diphosphate synthase (EC 2.5.1.90), at 573,373 to 574,302
GFF2511
GFF2512 - LSU ribosomal protein L21p, at 574,549 to 574,860
GFF2512
GFF2513 - LSU ribosomal protein L27p, at 574,873 to 575,133
GFF2513
Group
Condition
GFF2509
GFF2510
GFF2511
GFF2512
GFF2513
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-1.0
-1.2
N.D.
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-1.1
-1.1
N.D.
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-1.0
-1.0
N.D.
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-1.0
-1.0
N.D.
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.9
-1.0
N.D.
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.9
-0.9
N.D.
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.9
-0.9
N.D.
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.8
-1.0
N.D.
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.6
-0.7
N.D.
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.6
-0.8
N.D.
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.7
-0.6
N.D.
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.6
-0.7
N.D.
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.6
-0.7
N.D.
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.6
-0.6
N.D.
N.D.
N.D.
complex community
Community=guar; Passage=4
+0.7
+0.6
N.D.
N.D.
N.D.
complex community
Community=Locust bean gum; Passage=4
+0.7
+0.7
N.D.
N.D.
N.D.
complex community
Community=guar; Passage=4
+0.7
+0.7
N.D.
N.D.
N.D.
phage
phage_bap4
+0.9
+0.7
N.D.
N.D.
N.D.
complex community
Community=guar; Passage=4
+0.8
+0.8
N.D.
N.D.
N.D.
complex community
Community=guar; Passage=4
+0.9
+0.8
N.D.
N.D.
N.D.
complex community
Community=Locust bean gum; Passage=4
+0.9
+0.8
N.D.
N.D.
N.D.
complex community
Community=Locust bean gum; Passage=4
+0.9
+1.0
N.D.
N.D.
N.D.
complex community
Community=Locust bean gum; Passage=4
+1.1
+1.1
N.D.
N.D.
N.D.
phage
phage_bap4
+1.5
+1.2
N.D.
N.D.
N.D.
phage
phage_bap4
+1.6
+1.2
N.D.
N.D.
N.D.
phage
phage_bap4
+1.7
+1.4
N.D.
N.D.
N.D.
phage
phage_bap4
+4.1
+4.0
N.D.
N.D.
N.D.
phage
phage_bap4
+4.1
+4.0
N.D.
N.D.
N.D.
phage
phage_bap4
+4.2
+4.0
N.D.
N.D.
N.D.
phage
phage_bap4
+4.2
+4.1
N.D.
N.D.
N.D.
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